RNA id: TU264958



Basic Information


Item Value
RNA id TU264958
length 992
lncRNA type sense_over
GC content 0.49
exon number 5
gene id G178589
representative False

Chromosome Information


Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 687438 ~ 783476 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttttttttttttttttttttttttttatttttttttttttttttttttttttttttttttTTGTTTTCGTCCACTTTTATTCATCCGTAATGTGAAAAGCACAAACATACACTTTAAAAGAAAGTGTTTGGTCTCTTGGTGGTGAAACGGGGCTTGTGCTGGCGACGCAGAACCCGGTGAGGAAGAGGGAACTTGATCTTGGAGTCCTGTTGAATTGAGaacaaaacaagcattaaaaCCCATCGCGGTTACGCTGCATCATGTGACGCCGATCTGAACACGCAAACTCACGTGGAACTGCTTGATAGCGGGTCTGCGGCATTTGTTGGCTTCGATGATCTGCACCTTCATGATCTGGATGGCGTGAGCTCGGGCGCGATGCCTGGCCCCCATATCACGATCTGAGGAGACCAAAAACACGACGTTTACTACAGAGCACAAGCAAGCAGCAGAGGAGCGTGTCGCACCTTGAATTCACTTTCAGCGGCACGTTCACAGCCTACTAAAGGCGACAAGGTTCGGCTTTTCTGTCCGCACACAGGGCAAGGGCATGACACCGGCAGGAAATGACCTTTGGGTTTGTGTGTGCAGGCCGACGGCGAGCGTGTTTGACAGACTCACAGCACTGAGTGACGGCTCCAGACGTGGTCAGGTCTCTGTACTCGCGGTACATGTTGTGGGTTCCACTGCGAGAGTCGTAACGCAACCAGATGCCAAAGTTCTTCACCTTGAGAGGAGATTTCTCGTGGACCTGGGCCACAATAGACGATCTCTCCGGAGGCTTTCTTCATCTTCCTCAGCTGGGAGACGAAGTACCAGAAGCGAGACTTGGCCACTACATGGTTAGGGGCGAAGATCCTCATGCGGTAGAGAGGGGGTGCGGGGTTTTTAGCAGAGGGCAAGAGACGCCCCACAACCTTATACTCCCGAAGCTGCAGAGAGACACAAAACACAtacagacacacacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264928 lncRNA upstream 49312 637678 ~ 638126 (+) True G178577
TU264904 lncRNA upstream 128965 554014 ~ 558473 (+) True LOC122333249
XR_006248600.1 lncRNA upstream 132655 553127 ~ 554783 (+) False LOC122333249
TU264891 lncRNA upstream 181901 503211 ~ 505537 (+) True G178557
TU264875 lncRNA upstream 229758 456433 ~ 457680 (+) True G178550
TU265001 lncRNA downstream 15066 798542 ~ 799412 (+) True G178617
TU265003 lncRNA downstream 59360 842836 ~ 843975 (+) True G178619
TU265005 lncRNA downstream 61949 845425 ~ 910595 (+) True G178621
TU264947 lncRNA downstream 71318 854794 ~ 1001239 (+) False LOC122333252
TU265015 lncRNA downstream 83978 867454 ~ 868576 (+) True G178627
XM_043230748.1 mRNA upstream 55867 623437 ~ 631571 (+) True rtcb
XM_043230796.1 mRNA upstream 70657 613342 ~ 616781 (+) True echdc3
XM_043230815.1 mRNA upstream 87767 579792 ~ 599671 (+) True lrig3
XM_043230727.1 mRNA upstream 148882 524357 ~ 538556 (+) False LOC122333210
XM_043230734.1 mRNA downstream 18069 801545 ~ 835314 (+) False eps8a
XM_043230735.1 mRNA downstream 18069 801545 ~ 835314 (+) False eps8a
XM_043230736.1 mRNA downstream 18070 801546 ~ 835314 (+) False eps8a
XM_043230730.1 mRNA downstream 35418 818894 ~ 835314 (+) False eps8a
XM_043230728.1 mRNA downstream 35419 818895 ~ 835314 (+) True eps8a
TU264903 other upstream 148560 524311 ~ 538878 (+) True LOC122333210
TU264861 other upstream 231084 451126 ~ 456354 (+) True G178541
TU264814 other upstream 420710 264517 ~ 266728 (+) True G178503
TU264693 other upstream 473163 116245 ~ 214275 (+) True cunh11orf98
unassigned_transcript_2688 other downstream 16458 799934 ~ 800005 (+) True trnam-cau_120
TU264969 other downstream 52874 836350 ~ 838553 (+) True G178593

Expression Profile