RNA id: TU265156



Basic Information


Item Value
RNA id TU265156
length 703
RNA type TUCP
GC content 0.59
exon number 4
gene id dpysl5b
representative False

Chromosome Information


Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 230412 ~ 245009 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTTCTCATTGGTCCTCTCGTCTGTCAATCAAAGAGCCAGACGCGCGCTTTCGTCGCGGGCGCGCGCAGTGACAGCTGTCGTCGGGGGCGCGCGGCGGAGCGGGTGCACAACAGGAGCAAAAACATCAAATACCTTTGCTTACGTATAATGGCTGCGGGTTCGAGCTCCATGAGGATTCTCATCAAAGGTGGGCGGGTCGTGAACGATGATGTCACTCAGGAGGCGGATGTTTACATTGAGAACGGGCTCATCGTGCAGGTGGGGCGGGACCTGATGATTCCAGGCGGAGCCAAAGTGATTGACGCTTCCGGGAAGCTGGTGATTCCAGGAGGCATCGACTCCAGCGTTCATCTACATCAGACCTTCATGAACGCAAACACACAGGACGACTTCTACAGCGGCACCaagGCGGCGCTGCTGGGTGGCTCCACGATGGTGATCGCTCACGTTCTGCCCGAGAGAGACGCCTCGCTGCTGGAGGAGTTCGAGAGGATCCGCGCTCGGGCCGACGCCGAGGCCTGCTGTGATTACGCTCTGCACGTCAGCGTCTCCTGCTGGGGGCCCAAGGTGCGCAGGGAGATGGAGGTGCTGGTGGGAGAGAAGTGCGTGAACTCCTTCCAGATGTTCATGGCGTATAAAGACGTTCTGATGCTGAAGGACTCGGAGCTCTATCAGGCGATGCACACCTGTAAAGACatcggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006248597.1 lncRNA downstream 190055 34201 ~ 47001 (-) True LOC122333180
TU265158 lncRNA upstream 136 243215 ~ 245009 (-) False dpysl5b
TU265184 lncRNA upstream 118888 361967 ~ 391304 (-) True G178746
TU265180 lncRNA upstream 139223 382302 ~ 389371 (-) True LOC122333201
XR_006248598.1 lncRNA upstream 140608 383687 ~ 386116 (-) False LOC122333201
TU265181 lncRNA upstream 141676 384755 ~ 389371 (-) False LOC122333201
XM_043230791.1 mRNA downstream 7086 223370 ~ 229970 (-) True mapre3b
XM_043230792.1 mRNA downstream 7087 223370 ~ 229969 (-) False mapre3b
XM_043230777.1 mRNA downstream 14827 213214 ~ 222229 (-) True tmem214
XM_043230778.1 mRNA downstream 14828 213214 ~ 222228 (-) False tmem214
XM_043230749.1 mRNA downstream 25169 198129 ~ 211887 (-) True agbl5
XM_043230717.1 mRNA upstream 1999 245078 ~ 259665 (-) True sobpb
XM_043230790.1 mRNA upstream 30544 273623 ~ 299817 (-) True crybg1b
XM_043230718.1 mRNA upstream 60497 303576 ~ 309649 (-) True mrap2b
XM_043230716.1 mRNA upstream 74680 317759 ~ 329602 (-) True sim1b
XM_043230710.1 mRNA upstream 155309 398388 ~ 430427 (-) False ptpro
TU265131 other downstream 1304 223349 ~ 235752 (-) True G178709
unassigned_transcript_2687 other downstream 24058 212911 ~ 212998 (-) True trnay-gua_46
unassigned_transcript_2686 other downstream 24813 212171 ~ 212243 (-) True trnaa-agc_30
TU265160 other upstream 8398 251477 ~ 254842 (-) False sobpb
TU265167 other upstream 64133 307212 ~ 336614 (-) True G178734
TU265205 other upstream 266193 509272 ~ 520366 (-) False G178757
TU265206 other upstream 272638 515717 ~ 520366 (-) True G178757
XR_006248609.1 other upstream 510672 753751 ~ 753886 (-) True LOC122333265

Expression Profile