RNA id: TU265352



Basic Information


Item Value
RNA id TU265352
length 781
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G178862
representative True

Chromosome Information


Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 1127788 ~ 1128698 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGCGAGTTGAAGACGAAGTATTTGGGCGTGCACATGTCCTGCTGGTCTTCTGGGTGAGGGGTGAGCCGCACGGCGCTCTGGAGCGGGTCGTGATCCGGGCCCGCAGCGTGCTCCGGGTGAGCTTCTGAGATATACGCCAGCGCCGAGGTGTTCGGCAGAGAGTACAGGCCCAGAGCGTCAGAGCCGTTCAGACTCATGTTGGACTCGTGCTGGTAGAAGAACGGCAGAGGACACGGCAGGATCGTCTTCTTATAGATCAGCTACTCCCAGGAAGAACACCatgcaggagagagagaagccGCTGGTGTACCCCAGGTACCCTGATGAGGCGAGAACCAGAGTTACACACACTTCAcaacacctcacacacacacacacacacactcaccgaGGTTCTTCAGCAGAGACAGAGGCAGGATGATGGCGATGGACACCAGCACCACCACGTAATTCCCGTTCAGATACCattcactgcacacacacacacacacacacacacacacacacaagatcacGCTCTTCATTTCTACACCATAGATTGCTTCGGCTTCAGCTTTAAAGAGTCATTATTCAGTATTTTGTCTCATTTATatctaaacatctttaaaacGGGATCAAAACACCAATACAAATGATATCCCAGACACTGCTACAGATTTCCGTCACAAATCTTTTGCTTTCATCCACAAACAGTCTTACCCAGAGCTCTCCTCCAGCCCCAGAAAGGCTCTGATCACCTCGGGCAGCTCGTACTTGACTATGAACAGGTAGCTGGACATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU265332 lncRNA downstream 82343 1044382 ~ 1045445 (-) True G178853
XR_006248607.1 lncRNA downstream 105625 974052 ~ 1022163 (-) False LOC122333259
XR_006248606.1 lncRNA downstream 123533 974051 ~ 1004255 (-) True LOC122333259
XR_006248605.1 lncRNA downstream 143107 959497 ~ 984681 (-) False LOC122333259
XR_006248604.1 lncRNA downstream 143107 974057 ~ 984681 (-) False LOC122333259
TU265342 lncRNA upstream 501 1129199 ~ 1139105 (-) False G178856
TU265335 lncRNA upstream 6792 1135490 ~ 1139105 (-) True G178856
TU265361 lncRNA upstream 33589 1162287 ~ 1162846 (-) True G178868
TU265369 lncRNA upstream 47181 1175879 ~ 1176615 (-) True G178876
TU265318 lncRNA upstream 51990 1180688 ~ 1183631 (-) False arid2
XM_043230740.1 mRNA downstream 22415 1089815 ~ 1105373 (-) True tulp3
XM_043230741.1 mRNA downstream 22417 1089815 ~ 1105371 (-) False tulp3
XM_043230760.1 mRNA downstream 57345 1043383 ~ 1070443 (-) True ptn
XM_043230800.1 mRNA downstream 203528 914782 ~ 924260 (-) True mtpn
XM_043230799.1 mRNA downstream 203529 911904 ~ 924259 (-) False mtpn
XM_043230759.1 mRNA upstream 53272 1181970 ~ 1200891 (-) True arid2
XM_043230784.1 mRNA upstream 75018 1203716 ~ 1220286 (-) True gas2l3
XM_043230782.1 mRNA upstream 75018 1203716 ~ 1220285 (-) False gas2l3
XM_043230781.1 mRNA upstream 75018 1203716 ~ 1216077 (-) False gas2l3
XM_043230785.1 mRNA upstream 75018 1203716 ~ 1215741 (-) False gas2l3
XR_006248601.1 other downstream 203529 911904 ~ 924259 (-) False mtpn
TU265306 other downstream 237009 883253 ~ 890779 (-) False LOC122333240
XR_006248608.1 other downstream 373030 754625 ~ 754758 (-) True LOC122333264
XR_006248609.1 other downstream 373902 753751 ~ 753886 (-) True LOC122333265
TU265206 other downstream 607422 515717 ~ 520366 (-) True G178757
TU265340 other upstream 6792 1135490 ~ 1139105 (-) False G178856
TU265345 other upstream 6792 1135490 ~ 1139105 (-) False G178856

Expression Profile