RNA id: TU265379


Basic Information

Item Value
RNA id TU265379
length 481
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G178884
representative True

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 1237393 ~ 1237952 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATGTATGCAAATAAGGCACATTTAGATAGAATGAtcaaaatcatttgaatattaaaacataacatttcagaaaacctGCAATACAAAGCAACTgtcatatgatttattatttatctttttttatatcccTGTTCATCTTTGGTGTCTTAACGAGTGACACATACTTGATGTTCTCTGTAGGCCCCAGGATAGTTCTCCCGAGAGGTGTTTCCTGATAGGCTGTAGCGTGCAGGTAATCAAAGACCACTTCCTGCAGGTTGGTCTCCACTTCCTGCATCTCTCTGAGAATGACGCCCCGCTCTCGCTCGATCTCAGCCTCTCCCAGCATGCTGTTCTGAATAATGTCCGCCAGGATTTCCACCGCGGGCAGGTCTTTGGAGAAAGCTTTAGCGTAGTACACTGTCTGCTCTCTGGAGGTATACGCGTTCAGGTGAGCTCCCATGTTCTCGATCTCCAGCTCCAGGTCCAGCTGCGATCTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265318 lncRNA downstream 53762 1180688 ~ 1183631 (-) False arid2
TU265369 lncRNA downstream 60778 1175879 ~ 1176615 (-) True G178876
TU265361 lncRNA downstream 74547 1162287 ~ 1162846 (-) True G178868
TU265342 lncRNA downstream 98288 1129199 ~ 1139105 (-) False G178856
TU265335 lncRNA downstream 98288 1135490 ~ 1139105 (-) True G178856
XM_043230699.1 mRNA downstream 4180 1224154 ~ 1233213 (-) True tm7sf3
XM_043230784.1 mRNA downstream 17107 1203716 ~ 1220286 (-) True gas2l3
XM_043230782.1 mRNA downstream 17108 1203716 ~ 1220285 (-) False gas2l3
XM_043230781.1 mRNA downstream 21316 1203716 ~ 1216077 (-) False gas2l3
XM_043230785.1 mRNA downstream 21652 1203716 ~ 1215741 (-) False gas2l3
XM_043230698.1 mRNA upstream 3998 1241950 ~ 1249814 (-) True dnajc2
XM_043230705.1 mRNA upstream 14499 1252451 ~ 1260257 (-) True nudt4b
XM_043230704.1 mRNA upstream 14499 1252451 ~ 1260252 (-) False nudt4b
XM_043230695.1 mRNA upstream 25621 1263573 ~ 1266697 (-) True ube2nb
XM_043230723.1 mRNA upstream 29351 1267303 ~ 1267974 (-) True mrpl42
TU265340 other downstream 98288 1135490 ~ 1139105 (-) False G178856
TU265345 other downstream 98288 1135490 ~ 1139105 (-) False G178856
XR_006248601.1 other downstream 313134 911904 ~ 924259 (-) False mtpn
TU265306 other downstream 346614 883253 ~ 890779 (-) False LOC122333240
XR_006248608.1 other downstream 482635 754625 ~ 754758 (-) True LOC122333264

Expression Profile