RNA id: XM_043230806.1


Basic Information

Item Value
RNA id XM_043230806.1
length 2379
RNA type mRNA
GC content 0.50
exon number 17
gene id tmem181
representative False

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 152337 ~ 159109 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGAGGGGGGTCACGTGACCTCGCGTGGGTGACGTCATCGGGCTGATGTGTGCGGATACGCGCCGCCAACAAACATAACTCCGCGTGAATCGCGCCGCGGAGGAACCGAGAGCCGCGGAGGATGGAGCGgctggCCCCCATGCGTCTCTACACTCTCTCTAAGAGACACTTTGTTCTGGTGTTCGTGGTGTTCTTCTTCTGCTTCGGCGTCTCGACGCTCATCGGGGTGTCAGGACCGAAGATCATCAGCGAGAATTATTACAACGGGTTGAGTTTCAGCACCAACGGGTCAAAGAGCGGACCGTTTGACCTTCAATCTCCACCACTGTCCAACTACAACCAGCAGCTGTGGCTGACCTGCATCATCCAGCTGGACAGcagcaTTGCAGACCTGAGCTGGGAGGAGCTGGGGGTGAACGTGGATCTTCAGGGAGTGACTCAGGACGCTAGTGTGATGAGGATCAGTGATAACATTCATAACAAGAACCGGAGCCTGCGCTGCGCCGCTcaTCAGCCGGCGTGTGACGAGATCATCGTTCTTCATCTGGGGTATCTGAACTACACTCAGTACAAGATCAACGTCAGCTTCAGGAATCTTCAAGACGGCCTGAAGGACAAAATCAAAAACGTGACTTTTGTGttCAAGATGTACAACGCCACGTTCTCTCAGGTGGAGATCTGGTTCCGCTTCGTGTTTGTGGTGATGACCTTCATCGTGACCtgTATGTTCGCTCACTCTTTGAGAAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGATGTCCATTCTTcttcctctgctgctgctgtatAACGATCCGTTCTTCCCGCTCTCCTTCCTGGTGAACAGCTGGTTTCCCGGGACGCTGGACGCCTTCTTCCAGGCTCTGTTCCTGTGTGCCCTGCTGCTCTTCTGGCTGTGTGTGTATCACGGCATCCGAGTGCAGGGAGACCGGAGGTTCCTGACCTTCTACCTGCCCAAGCTGCTGGTCGTGGGGCTGCTGTGGCTCTCGGCCGTCACGCTGGGAATCTGGCAAACGGTGAATGAGCTGCAGGATCCCACGTATCAGTACAAAGTGGACATCCAGAACTTCCAGggCATGAAGGTCTTCTTCCTGTTGCTGGTGGCTGTGTATGTGCTGTATCTGGTGTTTCTGGTGCTGTGTGCCTGCTCCGAGCTCAAGAACGCACCCTACAtggATCTGCGGCTGAAGTTTCTGACGGCACTGACCCTGCTGGTGCTGGTGATCAGTGTGATTATTCTGTACCTGAGATTTGGCTCCAAGGCTTTGCAAGACAACTTTGTTTCTGAGCTCTCCACTCACTACCAGAACTCAGCTGAATTTCTGTCCTTCTACGGCCTGCTGAACTTCTATCTCTACACGCTAGCGTTCGTCTACTCTCCCTCCAGAAACGCTCTGTACGactCGCAGCTGAAGGACAACCCAGCGTTCTCCATGCTCAACGACTCGGACGATGAGGTCATTTACGGGAGCGACTACGAGGAAATGCCTCTTCAGAATGGCCGTGCCATCAAAGCCAGCGCCAAATACCAGGATGAGAGCGAGAGCGACTGAAAGCGGAGTGACTCCGGATCATGTATACAGATGAACCGTGTGTAAATATAGAGGTGTTTTTAACTCCGTTCCTGACCTCGGCTGGGGACTCTAAAGAGGAGAAATCAATCGtgtatattttcttttgcattcgagataattaagcacatttcaACCCTGTGATAATAAATCGGTTTAACACATAGTACCTTGACGAAGCAAgtataaacatctaaaaagaattattttataaatattttcatacgaaatgctgcttttttttttgttgtttttttgcaatgcagtAATAATTTAGGGTAAATGTGCTTAATTTTCATGAAAACCCCCCATTAAGGGTCTCTAAATCTTTTATTCCTTTGGTTCTTGAGCGAGAGATGTTGTGTTTATGTGATTGGCCTCATCCATCAGACTCTATTCAGAACGTGTGAGGAAGCTGCATATAACTCTATTGGTTTGGTTCTGTTTGGAGCGTCTCTGGAGCCTTCACTGGATCTTGTACTTCAGCCTTGTTTTCTCACATTCCTGTTTTATTGTGCCTCTACTCGTTTCTCTCCTGTTTTCCTCTACTTCTGATCATTGTTTTGTGGGTCTGAATCACTTCCAGGGTCCCGCTGAGGACCCGAgcgccttgtttttttttgtttggttcaCTCCGATGTCTTCTGAAGACGTGGTTTCATTGAGAGGTTCGCTGTGCCTTTCCACGTGTACATAAGATCATTCCCGAAGCGCCGAGCTTCACCTGCACTGTCGTGACGTCTGAGCGAATGTGGAATAAACTCTTCAGACACTTTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248597.1 lncRNA downstream 105336 34201 ~ 47001 (-) True LOC122333180
TU265158 lncRNA upstream 84850 243215 ~ 245009 (-) False dpysl5b
TU265184 lncRNA upstream 203602 361967 ~ 391304 (-) True G178746
TU265180 lncRNA upstream 223937 382302 ~ 389371 (-) True LOC122333201
XR_006248598.1 lncRNA upstream 225322 383687 ~ 386116 (-) False LOC122333201
TU265181 lncRNA upstream 226390 384755 ~ 389371 (-) False LOC122333201
XM_043230808.1 mRNA downstream 2229 145860 ~ 150108 (-) True mansc1
XM_043230686.1 mRNA downstream 7344 118043 ~ 144993 (-) True lrp6
XM_043230685.1 mRNA downstream 7353 118043 ~ 144984 (-) False lrp6
XM_043230687.1 mRNA downstream 36600 105797 ~ 115737 (-) True si:zfos-932h1.3
XM_043230773.1 mRNA downstream 50054 94220 ~ 102283 (-) False prr5b
XM_043230803.1 mRNA upstream 2066 160431 ~ 176615 (-) False tulp4a
XM_043230801.1 mRNA upstream 2066 160431 ~ 176615 (-) False tulp4a
XM_043230802.1 mRNA upstream 2066 160431 ~ 176583 (-) True tulp4a
XM_043230789.1 mRNA upstream 22320 180685 ~ 186824 (-) False si:ch211-51e12.7
XM_043230788.1 mRNA upstream 24304 182669 ~ 186825 (-) True si:ch211-51e12.7
unassigned_transcript_2686 other upstream 53806 212171 ~ 212243 (-) True trnaa-agc_30
unassigned_transcript_2687 other upstream 54546 212911 ~ 212998 (-) True trnay-gua_46
TU265131 other upstream 64984 223349 ~ 235752 (-) True G178709
TU265156 other upstream 78691 237056 ~ 243079 (-) False dpysl5b
TU265160 other upstream 93112 251477 ~ 254842 (-) False sobpb

Expression Profile