RNA id: XR_006248608.1



Basic Information


Item Value
RNA id XR_006248608.1
length 134
RNA type snoRNA
GC content 0.54
exon number 1
gene id LOC122333264
representative True

Chromosome Information


Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 754625 ~ 754758 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGCACACATAAACCCAAAGGTCATTTCCTGCCGGTGTCATGCCCTTGCCCTGTGTGCGGACAGAAAACCTGAACCTTGTCGCCTTTCGTAGGCTGTGAACGTGCCGCTGAAAGTGAATTCAAGGTGCGACACGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU265240 lncRNA downstream 201101 553100 ~ 553524 (-) True G178782
TU265236 lncRNA downstream 208840 545487 ~ 545785 (-) True G178780
TU265235 lncRNA downstream 214339 540059 ~ 540286 (-) True G178779
TU265200 lncRNA downstream 236649 514816 ~ 517976 (-) False G178757
TU265178 lncRNA downstream 274064 478193 ~ 480561 (-) True G178742
TU265303 lncRNA upstream 76579 831337 ~ 833743 (-) True G178828
TU265254 lncRNA upstream 101721 856479 ~ 946523 (-) True G178791
XR_006248605.1 lncRNA upstream 204739 959497 ~ 984681 (-) False LOC122333259
XR_006248606.1 lncRNA upstream 219293 974051 ~ 1004255 (-) True LOC122333259
XR_006248607.1 lncRNA upstream 219294 974052 ~ 1022163 (-) False LOC122333259
XM_043230707.1 mRNA downstream 93715 650578 ~ 660910 (-) False pthlha
XM_043230708.1 mRNA downstream 93715 650578 ~ 660910 (-) True pthlha
XM_043230747.1 mRNA downstream 108643 631484 ~ 645982 (-) True xpot
XM_043230794.1 mRNA downstream 131732 617323 ~ 622893 (-) True fbxo7
XM_043230691.1 mRNA upstream 3023 757781 ~ 774573 (-) True dusp16
XM_043230696.1 mRNA upstream 24430 779188 ~ 784949 (-) True gpr19
XM_043230779.1 mRNA upstream 32052 786810 ~ 799517 (-) False tbk1
XM_043230780.1 mRNA upstream 32052 786810 ~ 798899 (-) True tbk1
XM_043230738.1 mRNA upstream 81536 836294 ~ 844050 (-) False rpap3
XR_006248609.1 other downstream 739 753751 ~ 753886 (-) True LOC122333265
TU265205 other downstream 234259 509272 ~ 520366 (-) False G178757
TU265206 other downstream 234259 515717 ~ 520366 (-) True G178757
TU265167 other downstream 418011 307212 ~ 336614 (-) True G178734
TU265160 other downstream 499783 251477 ~ 254842 (-) False sobpb
TU265306 other upstream 128495 883253 ~ 890779 (-) False LOC122333240
XR_006248601.1 other upstream 157146 911904 ~ 924259 (-) False mtpn
TU265340 other upstream 380732 1135490 ~ 1139105 (-) False G178856
TU265345 other upstream 380732 1135490 ~ 1139105 (-) False G178856