RNA id: unassigned_transcript_2692


Basic Information

Item Value
RNA id unassigned_transcript_2692
length 73
RNA type tRNA
GC content 0.53
exon number 2
gene id trnar-ucu_54
representative True

Chromosome Information

Item Value
chromosome id NW_025048114.1
NCBI id JAEQBD010000459.1
chromosome length 1423374
location 1372888 ~ 1372977 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ggctctgtggcgcaatggatagcgcattggacttctaattcaaaggttgtgggttcgagtcccaccaGAGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU272073 lncRNA upstream 146797 1223268 ~ 1226091 (+) True G183463
TU272077 lncRNA upstream 208016 1164424 ~ 1164872 (+) True G183466
XR_006248714.1 lncRNA upstream 225115 1146042 ~ 1147773 (+) True LOC122334055
XR_006248713.1 lncRNA upstream 237783 1133203 ~ 1135105 (+) True LOC122334033
XM_043231931.1 mRNA upstream 26051 1344551 ~ 1346837 (+) True LOC122334042
XM_043231952.1 mRNA upstream 177459 1165329 ~ 1195429 (+) True psmd1
XM_043231930.1 mRNA upstream 213066 1155275 ~ 1159822 (+) True LOC122334039
XM_043231922.1 mRNA upstream 226943 1127863 ~ 1145945 (+) True LOC122334032
XM_043231933.1 mRNA upstream 248295 1119707 ~ 1124593 (+) True LOC122334044
unassigned_transcript_2691 other upstream 440 1372375 ~ 1372448 (+) True trnat-ugu_55
TU272093 other upstream 114228 1253951 ~ 1258660 (+) True G183477
TU271920 other upstream 526174 845580 ~ 846714 (+) True G183354
TU271863 other upstream 585948 783284 ~ 786940 (+) True G183316
unassigned_transcript_2690 other upstream 614593 758224 ~ 758295 (+) True trnag-ucc_28
unassigned_transcript_2693 other downstream 247 1373224 ~ 1373297 (+) True trnat-agu_69
unassigned_transcript_2694 other downstream 706 1373683 ~ 1373756 (+) True trnat-ugu_56
unassigned_transcript_2695 other downstream 1153 1374130 ~ 1374203 (+) True trnat-ugu_57
unassigned_transcript_2696 other downstream 1664 1374641 ~ 1374730 (+) True trnar-ucu_55
unassigned_transcript_2697 other downstream 1971 1374948 ~ 1375021 (+) True trnat-agu_70