RNA id: unassigned_transcript_2696


Basic Information

Item Value
RNA id unassigned_transcript_2696
length 73
RNA type tRNA
GC content 0.53
exon number 2
gene id trnar-ucu_55
representative True

Chromosome Information

Item Value
chromosome id NW_025048114.1
NCBI id JAEQBD010000459.1
chromosome length 1423374
location 1374641 ~ 1374730 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ggctctgtggcgcaatggatagcgcattggacttctaattcaaaggttgtgggttcgagtcccaccaGAGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU272073 lncRNA upstream 148550 1223268 ~ 1226091 (+) True G183463
TU272077 lncRNA upstream 209769 1164424 ~ 1164872 (+) True G183466
XR_006248714.1 lncRNA upstream 226868 1146042 ~ 1147773 (+) True LOC122334055
XR_006248713.1 lncRNA upstream 239536 1133203 ~ 1135105 (+) True LOC122334033
XM_043231931.1 mRNA upstream 27804 1344551 ~ 1346837 (+) True LOC122334042
XM_043231952.1 mRNA upstream 179212 1165329 ~ 1195429 (+) True psmd1
XM_043231930.1 mRNA upstream 214819 1155275 ~ 1159822 (+) True LOC122334039
XM_043231922.1 mRNA upstream 228696 1127863 ~ 1145945 (+) True LOC122334032
XM_043231933.1 mRNA upstream 250048 1119707 ~ 1124593 (+) True LOC122334044
unassigned_transcript_2695 other upstream 438 1374130 ~ 1374203 (+) True trnat-ugu_57
unassigned_transcript_2694 other upstream 885 1373683 ~ 1373756 (+) True trnat-ugu_56
unassigned_transcript_2693 other upstream 1344 1373224 ~ 1373297 (+) True trnat-agu_69
unassigned_transcript_2692 other upstream 1664 1372888 ~ 1372977 (+) True trnar-ucu_54
unassigned_transcript_2691 other upstream 2193 1372375 ~ 1372448 (+) True trnat-ugu_55
unassigned_transcript_2697 other downstream 218 1374948 ~ 1375021 (+) True trnat-agu_70
unassigned_transcript_2698 other downstream 682 1375412 ~ 1375485 (+) True trnat-ugu_58
unassigned_transcript_2699 other downstream 1129 1375859 ~ 1375932 (+) True trnat-ugu_59
unassigned_transcript_2700 other downstream 1639 1376369 ~ 1376458 (+) True trnar-ucu_56
unassigned_transcript_2701 other downstream 1948 1376678 ~ 1376751 (+) True trnat-agu_71