RNA id: TCONS_00010095


Basic Information

Item Value
RNA id TCONS_00010095
length 1614
RNA type mRNA
GC content 0.42
exon number 11
gene id XLOC_005249
representative False

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 15568761 ~ 15620090 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGATCGGTCGctataacgttaacgttactgtttttattttagtttgtccaATGGCAGCAAAAGTACCGTTACAGTGCAGgTTGTCCAGTTAATTAACGTGGTGTTGGAAAGACTACATGCGGCATGCCAGCTCTTACAATGTCAGAGATCGAGGACTGCCAAAGACGCTTTCAGGCTGCTGTCGACGTCATTCAAAGTCTACCTAAAAATGGTACCTACAAACCATCTTATGAAGTAATGCTGCGGTTTTATGGCCTGTTCAAACAGGCAGTCTGTGGCCCATGTACACTGTCACGCCCTGGATTTTGGGACCCTGTAGGACGTTACAAATGggAAGCTTGGAGTAATCTGGGAGAAATGAGTCGAGAGACGGCCATGGCTGCTTATGTGGATGAAATGAAAAAAGTTGCACAAGATGTCATTGACACCATGCAAATCAATGAAAAGAATGCATCCTATTTCCACTATTTTGAACCTCTTTACCATGTCATTCATGATATGCCCAGACCTCCAGAGGCACTTTTTTCTCTTAGTTCAGatgttaATGTGAAAGAACCAACTGGTGATGTGTTTAAACATAATGTGGATAGTGCAACTCAAGAACCAAGACTTCAACAGGATACAGAAACTTCCCTTAACAGTGAACTTCAACCTCAGAGCACAGAGCAACGTATGTCAGAGTGTCAGGGGCCGATTAGTGACACAGAGAGTGAAGTCTTCTGTGACTCGTTGGAACAGATGGATAATATAAAGCTGACTGCAGTACCAGATGGTAATAGTCCTTTCCAGAATGGTCGTACATGCATCGAGATCTCTGGTATCCAGGAGAGTCATTACAGTGCTCCATCACAGTTGGTTCAGATAGGAGTTGGACATGGTGAGGGGGCAGAAGACAGACATGATCCTCCTATGAGGATGACGACCGCAGGAAGAGAATGGTTGCAGCAGAACTGGAGGGACTCCCCAGGTTTCATGGCTCACCACAGTGCTGGACGGCTATCAGCAGCTGGCTCAGGGCAAGGGGACAGAGACAATTCTAAAAGTGGGTCTGGCCGGTTACAACAGCAGATTTTTCTAGCCCTACGGAAACTCCGAGAGGACATGCAAAGTGTCATGGAACGACTAGATGTGGTTGAAAGTCTTGCAACTGCAAATgCTCAGAATTCACATTGGATATCACATTTACAACGGACAGCTGGAGAGTCTGAGGAGAAATGGTGGCCATTTGAAATCTCTGGACGCACATTGATGCTGTTGTTGGTGTGGCCTTTTGTGACACAGTGGCTGAGTTTTCTCCTGAGATGGAAGAAGAGACAAATTCATGGGTGCAtatgaatttaataaatagtCAAGCTACAAGGATCACATATTTAATTGCCACTTCTCAGTCTCAGGTAAAAGAAGAAATGTTCTAAAATCCTATGTTCGAAATTAgatcacttaattttttatgaacaagTTGATGAACCAAGTTTAGGTCCTAGCATTGATTGTGAATATTTCAACGTGTTCCATTTATTTTTGGATAAAAATGGTTGTTTGTAATCATTTGTCTAAAAAATGTATGATATCCATACTATTGTGTTTTCAATAtaagtttactgtaaattttaa

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0000062 fatty-acyl-CoA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2074 Predicted to enable fatty-acyl-CoA binding activity. Is expressed in myoseptum and myotome. Orthologous to human ACBD4 (acyl-CoA binding domain containing 4).

Ensembl:

ensembl_id ENSDART00000150134

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00011110 lncRNA downstream 118503 15445574 ~ 15450258 (-) True XLOC_005247
TCONS_00011109 lncRNA downstream 324761 15242567 ~ 15244000 (-) True XLOC_005246
TCONS_00011108 lncRNA downstream 442712 15125409 ~ 15126049 (-) True XLOC_005244
TCONS_00010802 lncRNA downstream 448648 15117887 ~ 15120113 (-) False XLOC_005243
TCONS_00011111 lncRNA upstream 273253 15857732 ~ 15859869 (-) True XLOC_005250
TCONS_00010106 lncRNA upstream 861749 16446228 ~ 16447272 (-) False XLOC_005254
TCONS_00010107 lncRNA upstream 861751 16446230 ~ 16447270 (-) False XLOC_005254
TCONS_00010109 lncRNA upstream 861760 16446239 ~ 16447392 (-) False XLOC_005254
TCONS_00010110 lncRNA upstream 862341 16446820 ~ 16452181 (-) True XLOC_005254
TCONS_00010094 mRNA downstream 1657 15565344 ~ 15567104 (-) True XLOC_005248
TCONS_00010093 mRNA downstream 363674 15197857 ~ 15205087 (-) True XLOC_005245
TCONS_00010092 mRNA downstream 566142 14965600 ~ 15002619 (-) True XLOC_005242
TCONS_00010091 mRNA downstream 566198 14965587 ~ 15002563 (-) False XLOC_005242
TCONS_00010090 mRNA downstream 645806 14920088 ~ 14922955 (-) True XLOC_005241
TCONS_00010098 mRNA upstream 478081 16062560 ~ 16084835 (-) True XLOC_005251
TCONS_00010099 mRNA upstream 747937 16332416 ~ 16380961 (-) False XLOC_005252
TCONS_00010100 mRNA upstream 772759 16357238 ~ 16380242 (-) False XLOC_005252
TCONS_00010101 mRNA upstream 794477 16378956 ~ 16380593 (-) True XLOC_005252
TCONS_00010102 mRNA upstream 821119 16405598 ~ 16435150 (-) False XLOC_005253
TCONS_00010077 other downstream 1918471 13603739 ~ 13650290 (-) True XLOC_005231
TCONS_00010060 other downstream 3233430 12335216 ~ 12335331 (-) True XLOC_005222
TCONS_00010022 other downstream 5897624 9669927 ~ 9671137 (-) True XLOC_005196
TCONS_00010021 other downstream 5920416 9648228 ~ 9648345 (-) True XLOC_005195
TCONS_00010016 other downstream 6051808 9510871 ~ 9516953 (-) True XLOC_005191
TCONS_00010103 other upstream 823829 16408308 ~ 16416757 (-) False XLOC_005253
TCONS_00010104 other upstream 831331 16415810 ~ 16434838 (-) False XLOC_005253
TCONS_00010105 other upstream 847337 16431816 ~ 16434835 (-) True XLOC_005253
TCONS_00010111 other upstream 908873 16493352 ~ 16493468 (-) True XLOC_005255
TCONS_00010114 other upstream 987716 16572195 ~ 16572309 (-) True XLOC_005258

Expression Profile

//