RNA id: TU36595


Basic Information

Item Value
RNA id TU36595
length 693
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G24567
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 116199 ~ 116891 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAGTTTTGAGCATACTCggcccatggtaaaaactctgaccatctgtgttgttctctgtggcaataggtccgcaggtacctcccgatctcctgattaagtctctcgacctgtccattagcctgtgggtggtaacctgaggtaaggctcacattaatgtcgagCTGTTTACAGAAGGCCCTCCATACTTGGGAAGTAAATTGAGTACCTCTATCACTCACTATGTCCTCGGGTAATCCGTAGATTCTGAAGACGTGCTCGAACAGGGCGAGGGCAGTTTCCATGGCGGTGGGGAGGTTCTTCATGGGAACTAATCGACATGACTTAGAAAATCTatcaataatgactaaaatgactgTGAAACCGTTAGACAATGGTAAATCTGTGACAAAGTCAATGGATAGATTAGACCATGGTCGCTGAGGGATGGGCAGAGGCTTGAGCAAACCGGCAGGCAATTCTCTGGGggtcttgcattgtgcacataccTGGCATGCCTTGACATAGTTCGTCACATCCCGAGATATTGACGGCCACCAAAAGGCGTTCTTCACTAACTGTAGTGTTCtgttgatgcctggatgacctgaactTAGTGAAGTGTGTACCCATTGGAGGATGCGTTGGCGTATTGTTGATGGTACGTAATGTTTACCAGGAGGACATTGAGGGGGTGCTGGTTCATGTTGTAATtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36576 lncRNA upstream 29611 85235 ~ 86588 (+) True G24554
TU36571 lncRNA upstream 33676 75388 ~ 82523 (+) True G24553
TU36573 lncRNA upstream 33676 75388 ~ 82523 (+) False G24553
TU36574 lncRNA upstream 33676 75388 ~ 82523 (+) False G24553
TU36575 lncRNA upstream 33676 75388 ~ 82523 (+) False G24553
TU36599 lncRNA downstream 74501 191392 ~ 194183 (+) True cmah
TU36619 lncRNA downstream 99084 215975 ~ 281984 (+) False G24586
TU36621 lncRNA downstream 125675 242566 ~ 282841 (+) True G24587
TU36627 lncRNA downstream 133281 250172 ~ 252374 (+) True G24593
TU36628 lncRNA downstream 136374 253265 ~ 255853 (+) True G24594
XM_043237828.1 mRNA upstream 8894 90208 ~ 107305 (+) True frs2a
XM_043236240.1 mRNA upstream 27047 87004 ~ 89152 (+) False yeats4
XM_043236239.1 mRNA upstream 27047 87026 ~ 89152 (+) True yeats4
XM_043236241.1 mRNA upstream 27047 87026 ~ 89152 (+) False yeats4
XM_043237891.1 mRNA upstream 98295 13818 ~ 17904 (+) True LOC122343428
XM_043236793.1 mRNA downstream 67825 184716 ~ 193483 (+) False cmah
XM_043237774.1 mRNA downstream 78201 195092 ~ 199536 (+) True glipr1a
XM_043237775.1 mRNA downstream 88614 205505 ~ 213159 (+) True LOC122343357
XM_043236781.1 mRNA downstream 226701 343592 ~ 360922 (+) True zdhhc17
XM_043236911.1 mRNA downstream 317452 434343 ~ 439352 (+) True gpr22a
TU36577 other upstream 31237 83688 ~ 84962 (+) True G24555
TU36656 other downstream 176344 293235 ~ 295069 (+) True G24609
TU36680 other downstream 256636 373527 ~ 373824 (+) False G24632
TU36683 other downstream 256636 373527 ~ 374082 (+) True G24632
TU36860 other downstream 537201 654092 ~ 665530 (+) True G24771
TU37077 other downstream 1171421 1288312 ~ 1291224 (+) True ndufa5

Expression Profile