RNA id: TU36635


Basic Information

Item Value
RNA id TU36635
length 479
lncRNA type inter_gene
GC content 0.39
exon number 3
gene id G24597
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 259399 ~ 260703 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGGGCTGGCCTGCATCTGAGAATTTTACTTTAATGTCTTGTAAGTGCTTTAGGATTGGTTCATCATGCTCCTggaATTTCGCTGAGAAGGTCGACATTCTTGAAAACCGTGAGCCAGAATTCTGGGATCCCTTTAGGGTCTTCCTTCTCCTCgtctttcttctcctcctccactTTGGCCTTTTCCTTCATTTCCTCCTGtgtcagctcttcctcttcatcttgTTTCCACTCACACTCCTCATCTGTGGGTTCGTACGCTGCTCTCACGATATCACTCCGCTAAAGACaagtttaaaacattaatcCAAGGCATTTCTAGAAGTTAAAACTAGAGAAGTAAACTAGTGAATCAATTACTCAGATTCAGCTGATTTACAATGAATCCGTTTAGTTACTATGCTAAACCAGGgttgtcaaaataaatgttattttattactacaaataataaaaaaaggaagtaaaaaTACACACTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36628 lncRNA upstream 3546 253265 ~ 255853 (+) True G24594
TU36627 lncRNA upstream 7025 250172 ~ 252374 (+) True G24593
TU36599 lncRNA upstream 65216 191392 ~ 194183 (+) True cmah
TU36595 lncRNA upstream 142508 116199 ~ 116891 (+) True G24567
TU36576 lncRNA upstream 172811 85235 ~ 86588 (+) True G24554
TU36637 lncRNA downstream 753 261456 ~ 261964 (+) True G24599
TU36617 lncRNA downstream 19296 279999 ~ 281984 (+) True G24586
TU36620 lncRNA downstream 19296 279999 ~ 281984 (+) False G24586
TU36676 lncRNA downstream 101739 362442 ~ 362768 (+) True G24628
TU36679 lncRNA downstream 111671 372374 ~ 372853 (+) True G24631
XM_043237775.1 mRNA upstream 46240 205505 ~ 213159 (+) True LOC122343357
XM_043237774.1 mRNA upstream 59863 195092 ~ 199536 (+) True glipr1a
XM_043236793.1 mRNA upstream 65916 184716 ~ 193483 (+) False cmah
XM_043237828.1 mRNA upstream 152094 90208 ~ 107305 (+) True frs2a
XM_043236241.1 mRNA upstream 170247 87026 ~ 89152 (+) False yeats4
XM_043236781.1 mRNA downstream 82889 343592 ~ 360922 (+) True zdhhc17
XM_043236911.1 mRNA downstream 173640 434343 ~ 439352 (+) True gpr22a
XM_043236912.1 mRNA downstream 173640 434343 ~ 439352 (+) False gpr22a
XM_043236913.1 mRNA downstream 176480 437183 ~ 439352 (+) False gpr22a
XM_043236972.1 mRNA downstream 599893 860596 ~ 863551 (+) True LOC122342832
TU36577 other upstream 174437 83688 ~ 84962 (+) True G24555
TU36656 other downstream 32532 293235 ~ 295069 (+) True G24609
TU36680 other downstream 112824 373527 ~ 373824 (+) False G24632
TU36683 other downstream 112824 373527 ~ 374082 (+) True G24632
TU36860 other downstream 393389 654092 ~ 665530 (+) True G24771
TU37077 other downstream 1027609 1288312 ~ 1291224 (+) True ndufa5

Expression Profile