RNA id: TU36680



Basic Information


Item Value
RNA id TU36680
length 298
RNA type TUCP
GC content 0.67
exon number 1
gene id G24632
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 373527 ~ 374082 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTTGAGCCGGCTGAGGGCTCTCTTGTGCACGTGCTTCCTGTGGTAATCTGTGCCCACGATGCTCAGGGCTGCTCAGCGTATCCGGCACACCGAACGCCCCTCCCGCCATCACAAAGCGAGCCGGCGACATCACGGTGGGCACGCTGAAACTCAGCCCGCTGCTGGCGGCCCCCTCGGCGCCGGAGCTGGGCGTCGCACCCGCTATGAGCGGCGAAGGCACCAGAAAATACGGCATGGCCACAGCCGGCACGCCGCCCTGCCCGTGTCCCGCCGGCACGAGGAAGTTCAGACCGTTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36679 lncRNA upstream 674 372374 ~ 372853 (+) True G24631
TU36676 lncRNA upstream 10759 362442 ~ 362768 (+) True G24628
TU36629 lncRNA upstream 57961 253265 ~ 315566 (+) False G24594
TU36621 lncRNA upstream 90686 242566 ~ 282841 (+) True G24587
TU36619 lncRNA upstream 91543 215975 ~ 281984 (+) False G24586
TU36684 lncRNA downstream 734 374558 ~ 374844 (+) True G24633
TU36685 lncRNA downstream 2101 375925 ~ 376208 (+) True G24634
TU36686 lncRNA downstream 5379 379203 ~ 379444 (+) True G24635
TU36692 lncRNA downstream 6727 380551 ~ 383178 (+) True G24638
XR_006250652.1 lncRNA downstream 13371 387195 ~ 388081 (+) True LOC122342795
XM_043236781.1 mRNA upstream 12605 343592 ~ 360922 (+) True zdhhc17
XM_043237775.1 mRNA upstream 160368 205505 ~ 213159 (+) True LOC122343357
XM_043237774.1 mRNA upstream 173991 195092 ~ 199536 (+) True glipr1a
XM_043236793.1 mRNA upstream 180044 184716 ~ 193483 (+) False cmah
XM_043237828.1 mRNA upstream 266222 90208 ~ 107305 (+) True frs2a
XM_043236911.1 mRNA downstream 60519 434343 ~ 439352 (+) True gpr22a
XM_043236912.1 mRNA downstream 60519 434343 ~ 439352 (+) False gpr22a
XM_043236913.1 mRNA downstream 63359 437183 ~ 439352 (+) False gpr22a
XM_043236972.1 mRNA downstream 486772 860596 ~ 863551 (+) True LOC122342832
XM_043236966.1 mRNA downstream 493372 867196 ~ 888759 (+) False LOC122342829
TU36656 other upstream 78458 293235 ~ 295069 (+) True G24609
TU36577 other upstream 288565 83688 ~ 84962 (+) True G24555
TU36860 other downstream 280268 654092 ~ 665530 (+) True G24771
TU37077 other downstream 914488 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 1296688 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 1410468 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2741684 3115508 ~ 3117988 (+) True ninj2

Expression Profile