RNA id: TU36684


Basic Information

Item Value
RNA id TU36684
length 287
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G24633
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 374558 ~ 374844 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTCGCTTTCTATGGAAGCAGAGCGTTTGCTTCGTTTAGCTGCCTgctcctcatcctcttcctgtggtctctctctcttcttcagaCGCCCCTCGCCGTGACCTGAGACGTCTGGCACGTGTCCGCTGTACAGCATGAGCAGGGGCGTTTGCGGCAGACCGGGCAGGTACGCTAGCGGGTGAGGGGCAAACTGGGAAACGGGAAGTGATGCGTACGACACGTCGGCCTGAAGAGGCATCGCTAGTGAAGCCGGTCCAGCAGACGATGCTACAGGACTGGGCTGAGCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36679 lncRNA upstream 1705 372374 ~ 372853 (+) True G24631
TU36676 lncRNA upstream 11790 362442 ~ 362768 (+) True G24628
TU36617 lncRNA upstream 92574 279999 ~ 281984 (+) True G24586
TU36620 lncRNA upstream 92574 279999 ~ 281984 (+) False G24586
TU36637 lncRNA upstream 112594 261456 ~ 261964 (+) True G24599
TU36685 lncRNA downstream 1081 375925 ~ 376208 (+) True G24634
TU36686 lncRNA downstream 4359 379203 ~ 379444 (+) True G24635
TU36692 lncRNA downstream 5707 380551 ~ 383178 (+) True G24638
XR_006250652.1 lncRNA downstream 12351 387195 ~ 388081 (+) True LOC122342795
TU36708 lncRNA downstream 59547 434391 ~ 436596 (+) False gpr22a
XM_043236781.1 mRNA upstream 13636 343592 ~ 360922 (+) True zdhhc17
XM_043237775.1 mRNA upstream 161399 205505 ~ 213159 (+) True LOC122343357
XM_043237774.1 mRNA upstream 175022 195092 ~ 199536 (+) True glipr1a
XM_043236793.1 mRNA upstream 181075 184716 ~ 193483 (+) False cmah
XM_043237828.1 mRNA upstream 267253 90208 ~ 107305 (+) True frs2a
XM_043236911.1 mRNA downstream 59499 434343 ~ 439352 (+) True gpr22a
XM_043236912.1 mRNA downstream 59499 434343 ~ 439352 (+) False gpr22a
XM_043236913.1 mRNA downstream 62339 437183 ~ 439352 (+) False gpr22a
XM_043236972.1 mRNA downstream 485752 860596 ~ 863551 (+) True LOC122342832
XM_043236966.1 mRNA downstream 492352 867196 ~ 888759 (+) False LOC122342829
TU36683 other upstream 476 373527 ~ 374082 (+) True G24632
TU36680 other upstream 734 373527 ~ 373824 (+) False G24632
TU36656 other upstream 79489 293235 ~ 295069 (+) True G24609
TU36577 other upstream 289596 83688 ~ 84962 (+) True G24555
TU36860 other downstream 279248 654092 ~ 665530 (+) True G24771
TU37077 other downstream 913468 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 1295668 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 1409448 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2740664 3115508 ~ 3117988 (+) True ninj2

Expression Profile