RNA id: TU36685


Basic Information

Item Value
RNA id TU36685
length 284
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G24634
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 375925 ~ 376208 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAAGGCCTGTGAGGCGTGCTGGGGGCGGAGCTTATCAGTCTTTGATTGACAGGAAGTGCGGGGAcgacctgaaaggaggagtgACGCATCATCTTCTCCCGCCGTTCCCCGGTGGGGCCGATCTGAGCCGCCGAGACTCTCAGATCGTCTGAATCTGAAAGACGTGCAACCAATAATCACATACGACCGTCGGTTTCCCACGTGACCAGTCTTAAGCGTCATTTTCAGACTTATACATCATATAAAAGATGAATAGATAAGCTTGTTAGGACAGGTCAGTATTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36684 lncRNA upstream 1081 374558 ~ 374844 (+) True G24633
TU36679 lncRNA upstream 3072 372374 ~ 372853 (+) True G24631
TU36676 lncRNA upstream 13157 362442 ~ 362768 (+) True G24628
TU36617 lncRNA upstream 93941 279999 ~ 281984 (+) True G24586
TU36620 lncRNA upstream 93941 279999 ~ 281984 (+) False G24586
TU36686 lncRNA downstream 2995 379203 ~ 379444 (+) True G24635
TU36692 lncRNA downstream 4343 380551 ~ 383178 (+) True G24638
XR_006250652.1 lncRNA downstream 10987 387195 ~ 388081 (+) True LOC122342795
TU36708 lncRNA downstream 58183 434391 ~ 436596 (+) False gpr22a
TU36752 lncRNA downstream 203901 580109 ~ 580350 (+) True G24687
XM_043236781.1 mRNA upstream 15003 343592 ~ 360922 (+) True zdhhc17
XM_043237775.1 mRNA upstream 162766 205505 ~ 213159 (+) True LOC122343357
XM_043237774.1 mRNA upstream 176389 195092 ~ 199536 (+) True glipr1a
XM_043236793.1 mRNA upstream 182442 184716 ~ 193483 (+) False cmah
XM_043237828.1 mRNA upstream 268620 90208 ~ 107305 (+) True frs2a
XM_043236911.1 mRNA downstream 58135 434343 ~ 439352 (+) True gpr22a
XM_043236912.1 mRNA downstream 58135 434343 ~ 439352 (+) False gpr22a
XM_043236913.1 mRNA downstream 60975 437183 ~ 439352 (+) False gpr22a
XM_043236972.1 mRNA downstream 484388 860596 ~ 863551 (+) True LOC122342832
XM_043236966.1 mRNA downstream 490988 867196 ~ 888759 (+) False LOC122342829
TU36683 other upstream 1843 373527 ~ 374082 (+) True G24632
TU36680 other upstream 2101 373527 ~ 373824 (+) False G24632
TU36656 other upstream 80856 293235 ~ 295069 (+) True G24609
TU36577 other upstream 290963 83688 ~ 84962 (+) True G24555
TU36860 other downstream 277884 654092 ~ 665530 (+) True G24771
TU37077 other downstream 912104 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 1294304 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 1408084 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2739300 3115508 ~ 3117988 (+) True ninj2

Expression Profile