RNA id: XM_043236912.1


Basic Information

Item Value
RNA id XM_043236912.1
length 3078
RNA type mRNA
GC content 0.47
exon number 3
gene id gpr22a
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 434343 ~ 439352 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gagatgaGTAGGTAGGGCATTTTGAAAGCGCTGAGCGTAGGGATGGTGAGAGAGGAAGACTGAGAGGGAAGGAACAAGGGAGAAGGAGAGGAGCAGATCTCTAAGCGTGATGCATGGCACTACATCCTACAACATCTGACTTCCCTGCCCCCCCTTGACAGGCAAGGGAGAGCTCACAGAAAGGCAGATAGAGGAAGACAGCCAGACTCATCCCGTCAGATAAGCATGTCCTTTAGTACTCGTCCTGGCATGGCTCTACTCAAACTGGGAAATATATGGGCTACCAGGTCACTCACTCTTATGGCAGCGATGAGAGCCAGAGTGTGAAACTACTGAGGATGGAGCCCTTGTTCCGGTGTCCCACATGAACACTGTGAAAAAGAGAGGATAAATATATGCCACGCAGTGCACCGGCCTGACTACCTCCTTCCCTCTGGAAACCTGTGACCTTGTTGTGATTACTGTGTACTGCTGTCTACCTGCCTGGTCTCCTGGAGCTATACTGTGGCACAGCAGGTGGGAGTGTGATTTACTCAGGTGGAATACAAGGGGCCATGGACTCTGTAGGAGTCAGTGCAACTTTTGTTATATAGCGAGGAGGGAATGCCAGTTGTGACCTGTCACACTGAGGGAGATTTTCTTGTTGTGGTTCGCAAAGACtggaataaacaatgaaaagagAGGACTTTTGCGAGGATGGGACATGGTGCTGATCTGTTCGGCCAACACAAAGGACAAAGGCTAAAAACAAGCCTGAATACAACGCAGCTTTCATGTCAGGACCACGTGGATATTACAATGCACAAACCCTTCCCACGCTCTGAAAAGGAAGAGCAGAGTGTTTCCATCTCCCACATCCTCCCACAGAAATCTGAGGATGCAAGGGAAAGAGGTATGAGCTGTTTAGACGGTGTTTAATCAACCCTACAGAGAGGTGTTTGAGGGTGTCCTCGCTTGTCCAGTCTGTGCCATGCTGGGGCTGAGGACAGCCCTAGCTGATGCATTTGTTAGATAttagatcattaaaaaaaaaaaaaaggagcaagTACATAAGAGAATGGCATTGAAGGAGCAAAGGACACTGCTGAGATAAAGAGGCGTTGGAGTATGGTTGGCGTCTATGACAGCCTGCCAACAGATCAGCGCTTTGGTTGCATTTGCTACACGAGCTCCTAACGAGGACAGTGAACAAGGGAGGGGAGAATGCATACCCCTCCTGTGCTGGGATTCCAGACCATCATGAGCAACGTCACTGTCCTCGATAACGTTGAAACTCTTGACTTCGAAATGGACTTGGACACTCCTTACCCTGTCAGCTTCCAGGTGTCTCTAACAGGTTTCCTCATGCTGGAGATCGTGCTGGGTCTCAGCAGCAACCTGACAGTGCTGGCTCTCTATTGTATGAAGTCAAACCTGGTGAGCTCAGTCAGCAACATCGTAACCATGAACCTTCATGTGCTGGACGTCCTGGTGTGTGTGGGCTGCATCCCACTTACAATTGTGGTGGTGCTACTGCCACTGGAAGGCAACAGCGCACTCATTTGCTGCTTCCACGAGGCTTGCGTTTCTTTTGCTAGCGTGGCTACTGCTGCCAATGTCTTGGCCATCACACTAGACCGCTATGACATCTCAGTTAGGCCTGCAAATCGAGTTCTGACAATGGGACGAGCAGTGGCCTTACTCGGGTCCATTTGGGCTTTATCGTTTCTTAGCTTTCTGGTACCCTTCATAGAAGAGGGTTTCTTCAGCCAGGCAGGTAACGAAAGGAATCaaacagaggaagaggaacCGTCAAACCAATATTACACTGAATTGGGTCTCTACTATCACCTGTTGGCACAGATACCGATCTTCTTCTTCACGGCTGTGGTCATGTTGGTTACTTACTACAAGATCTTGCAGGCGCTCAACATCCGCATTGGCACACGTTTCCATTCGGCGCCCAAGAAGAAACCGAGGAAGAAAAAGACCATCTCCATGACTTCCACTCAGCCGGAGTCCACCGATGCCTCACAAAGCAGCGCGGGAAGGAATCCGCCGCTGGGCATGCGTACCTCTGTGTCCGTGATCATAGCCCTCCGCCGGGCCGTCAAAAGGCACAGGGAACGCCGTGAACGACAAAAGAGGGTTTTCCGCATGTCGCTTCTTATCATCTCCACTTTCCTGCTTTGCTGGACACCTATCACCGTGCTCAACACGGTTATCCTGAGTGCAGGGCCGAGCAACTTCACTGTGCGTCTCAGACTGGGCTTCCTGGTCATGGCTTATGGAACCACCATTTTTCACCCGCTGCTCTATGCCTTCACTCGGCAGAAATTTCAGAAGGTTCTAAAGAGTAAAATGAAGAAGCGTGTCGTTTCGGTTGTAGAGGCTGACCCTATGCCCAATAATGTGGTCATCCACAACTCATGGATTGAcccaaaaaggaacaaaaaggtGACTTTTGAGGAGACGGAGGTCAGGCAGAAATGCCTCTCATCAGAGGATGTGGAATGAGCTACTGGGCCAATTTAAGGCAAACATCCGCATCAGGTACAGAATCATTAAAAAGGGAAACCACTAATCCAAAGCAGTAATGAATTTAAGTGTATTAATTGTACAGTATCTCAAGAGGaataatttattactatttattgtaATGGTGACTATTGTAGATGTCATAGGTGGTAAAATGTACATACTGCATGTATTTTATTGAAGTGGTCCTAGAGATTGTACATACATACCCAAGTAAACTATAAACCACAAATGTAAAGATGTAGAAACAGATGCTCCTGGGTTTGTTCTTTTGCATTAAATAGCCCCAAAAATGGCACATGAATTTTTATGCTCTTAAGATGAACCCTGAGCAACTGTGATGACACATATTtctcaaattgttttttttttcactttgtagAGAAAGTGGTTATATGTCTTTGTTCTCTTTTGGTTTCAGCCACTTCAATTTTTACTGTTGCAAAATATAAGAAACACTGTTAAGAATTTACCCAGTGAGTTTCATTAAGTGGATATTACCTGCCCTCCACCCTGCAATAAAAGGAACAAGATGGCTATATTACTCAGGTCAACAAGTCA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250652.1 lncRNA upstream 46262 387195 ~ 388081 (+) True LOC122342795
TU36692 lncRNA upstream 51165 380551 ~ 383178 (+) True G24638
TU36686 lncRNA upstream 54899 379203 ~ 379444 (+) True G24635
TU36685 lncRNA upstream 58135 375925 ~ 376208 (+) True G24634
TU36684 lncRNA upstream 59499 374558 ~ 374844 (+) True G24633
TU36752 lncRNA downstream 140757 580109 ~ 580350 (+) True G24687
TU36831 lncRNA downstream 167935 607287 ~ 607514 (+) True G24746
TU36836 lncRNA downstream 176248 615600 ~ 615856 (+) True G24751
TU36839 lncRNA downstream 180125 619477 ~ 619696 (+) True G24754
TU36846 lncRNA downstream 183899 623251 ~ 625225 (+) True G24758
XM_043236781.1 mRNA upstream 73421 343592 ~ 360922 (+) True zdhhc17
XM_043237775.1 mRNA upstream 221184 205505 ~ 213159 (+) True LOC122343357
XM_043237774.1 mRNA upstream 234807 195092 ~ 199536 (+) True glipr1a
XM_043236793.1 mRNA upstream 240860 184716 ~ 193483 (+) False cmah
XM_043237828.1 mRNA upstream 327038 90208 ~ 107305 (+) True frs2a
XM_043236972.1 mRNA downstream 421244 860596 ~ 863551 (+) True LOC122342832
XM_043236966.1 mRNA downstream 427844 867196 ~ 888759 (+) False LOC122342829
XM_043236967.1 mRNA downstream 427844 867196 ~ 888759 (+) False LOC122342829
XM_043236968.1 mRNA downstream 427844 867196 ~ 888759 (+) False LOC122342829
XM_043236963.1 mRNA downstream 427844 867196 ~ 888759 (+) False LOC122342829
TU36683 other upstream 60261 373527 ~ 374082 (+) True G24632
TU36680 other upstream 60519 373527 ~ 373824 (+) False G24632
TU36656 other upstream 139274 293235 ~ 295069 (+) True G24609
TU36577 other upstream 349381 83688 ~ 84962 (+) True G24555
TU36860 other downstream 214740 654092 ~ 665530 (+) True G24771
TU37077 other downstream 848960 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 1231160 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 1344940 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2676156 3115508 ~ 3117988 (+) True ninj2

Expression Profile