RNA id: TU36752


Basic Information

Item Value
RNA id TU36752
length 242
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G24687
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 580109 ~ 580350 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTGGGTTTTCACGCTTAGTTTGACTGActaattcttttaaatgtaatgtattagaCATAATTAAGGATTTGCATAAAAGCGTTAATGCATTAGTCCCAAGGCATGacttttttgattttcttctttggtaccgttttttttttgcacactgatTTTTAGTTCATTAACAATGACCAATAATCACAATCCCCTGCCGTATCAAACTAAATCCACACACTGTACagtttaattacagtttaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36708 lncRNA upstream 143513 434391 ~ 436596 (+) False gpr22a
XR_006250652.1 lncRNA upstream 192028 387195 ~ 388081 (+) True LOC122342795
TU36692 lncRNA upstream 196931 380551 ~ 383178 (+) True G24638
TU36686 lncRNA upstream 200665 379203 ~ 379444 (+) True G24635
TU36685 lncRNA upstream 203901 375925 ~ 376208 (+) True G24634
TU36831 lncRNA downstream 26937 607287 ~ 607514 (+) True G24746
TU36836 lncRNA downstream 35250 615600 ~ 615856 (+) True G24751
TU36839 lncRNA downstream 39127 619477 ~ 619696 (+) True G24754
TU36846 lncRNA downstream 42901 623251 ~ 625225 (+) True G24758
TU36856 lncRNA downstream 69159 649509 ~ 651593 (+) True G24768
XM_043236911.1 mRNA upstream 140757 434343 ~ 439352 (+) True gpr22a
XM_043236912.1 mRNA upstream 140757 434343 ~ 439352 (+) False gpr22a
XM_043236913.1 mRNA upstream 140757 437183 ~ 439352 (+) False gpr22a
XM_043236781.1 mRNA upstream 219187 343592 ~ 360922 (+) True zdhhc17
XM_043237775.1 mRNA upstream 366950 205505 ~ 213159 (+) True LOC122343357
XM_043236972.1 mRNA downstream 280246 860596 ~ 863551 (+) True LOC122342832
XM_043236966.1 mRNA downstream 286846 867196 ~ 888759 (+) False LOC122342829
XM_043236967.1 mRNA downstream 286846 867196 ~ 888759 (+) False LOC122342829
XM_043236968.1 mRNA downstream 286846 867196 ~ 888759 (+) False LOC122342829
XM_043236963.1 mRNA downstream 286846 867196 ~ 888759 (+) False LOC122342829
TU36683 other upstream 206027 373527 ~ 374082 (+) True G24632
TU36680 other upstream 206285 373527 ~ 373824 (+) False G24632
TU36656 other upstream 285040 293235 ~ 295069 (+) True G24609
TU36577 other upstream 495147 83688 ~ 84962 (+) True G24555
TU36860 other downstream 73742 654092 ~ 665530 (+) True G24771
TU37077 other downstream 707962 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 1090162 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 1203942 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2535158 3115508 ~ 3117988 (+) True ninj2

Expression Profile