RNA id: TU36801



Basic Information


Item Value
RNA id TU36801
length 495
lncRNA type inter_gene
GC content 0.65
exon number 1
gene id G24724
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 212605 ~ 213246 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGTCGCTtgcacttaaaaacaaaacacaaatacagtccGTTGAGGAATGAACGATCTCGTCGGTTTCTTCTCACGGATATATTCCCAGCGCGTCCCAGAAGTCGCAGATGCCGTCCCGTGATCCGCTCTGCGCGTGTGAATGTAGCGTGAGGTTCAGGACCAGCCAGCCGCTGTCAGCCGTGTAGCGCGGCCAGGCCGGAGGACGCCGCCGCCGGCAGAACGCGCTGGAGTCCGCGTGAGCTCCGGGCTCTCCGGCGTGAGCGAACGAGCCCCAGTAACACAGCGTCCGGTCGGACAGCAGCCGCTCCGCCGGAGTCATGCTGAGATTCGCCGCCGGCGCCGAGTCGAACACGAAGGGCAGCTCCGCGCCGTGACACGCGTGACGGTAACAGAACGTCAGGCCCGACCACAAGCCCGGGTCGCTCGGCGCGTGATCGAACACGTACATCCACACCGAGCTACCGGAGGCCGCGGCGGCGCGCGCAGACCTCCGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36787 lncRNA downstream 3785 205893 ~ 208820 (-) True G24712
TU36788 lncRNA downstream 18446 191396 ~ 194159 (-) True G24713
TU36792 lncRNA upstream 66899 279998 ~ 281987 (-) False osbpl8
TU36823 lncRNA upstream 193543 406642 ~ 465393 (-) False slco1c1
TU36884 lncRNA upstream 391784 604883 ~ 605114 (-) True G24792
TU36887 lncRNA upstream 399292 612391 ~ 612843 (-) True G24795
TU36888 lncRNA upstream 400028 613127 ~ 613653 (-) True G24796
XM_043237773.1 mRNA downstream 7241 199811 ~ 205364 (-) False krr1
XM_043237772.1 mRNA downstream 7241 199811 ~ 205364 (-) True krr1
XM_043236794.1 mRNA downstream 28175 177273 ~ 184430 (-) True ccdc107
XM_043236160.1 mRNA downstream 41271 138800 ~ 171334 (-) False kcnc2
XM_043237830.1 mRNA upstream 37042 250141 ~ 252421 (-) True phlda1
XM_043236959.1 mRNA upstream 40167 253266 ~ 267765 (-) True nap1l1
XM_043236958.1 mRNA upstream 40167 253266 ~ 267764 (-) False nap1l1
XM_043236957.1 mRNA upstream 40167 253266 ~ 267764 (-) False nap1l1
XM_043236595.1 mRNA upstream 68622 281721 ~ 341953 (-) False osbpl8
TU36783 other downstream 21363 186460 ~ 191242 (-) True G24708
TU36763 other downstream 139119 56637 ~ 73486 (-) False si:dkey-97m3.1
TU36762 other downstream 178689 28072 ~ 33916 (-) False LOC122343420
TU36754 other downstream 201504 10833 ~ 11101 (-) True G24689
TU36940 other upstream 695847 908946 ~ 933108 (-) False pik3cg
TU37001 other upstream 856061 1069160 ~ 1070096 (-) True G24875
XR_006250650.1 other upstream 1396261 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other upstream 1396261 1609360 ~ 1618298 (-) False zgc:113263
TU37319 other upstream 1440492 1653591 ~ 1654807 (-) False ccdc167

Expression Profile