RNA id: TU36831


Basic Information

Item Value
RNA id TU36831
length 228
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G24746
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 607287 ~ 607514 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

taataACTGTCAATGTTGTCATTTCACAAATTCATGATAAAAAGCAGCGGTACAGAAGACAGCGGCGTTGTCTTTCAGCTTAATGATGTTCAAACGGTTCAATAGGTGTCAGTGAGCTACAGAAGCAACTCTAAAAGAAACAACAGCGTTGATATTCAGTTCCAATTTTGTTCTCTATAGTTCAGTAAGTGCCAGTGTGAGAAAATAATTCAGTTTCAGCTACaaaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36752 lncRNA upstream 26937 580109 ~ 580350 (+) True G24687
TU36708 lncRNA upstream 170691 434391 ~ 436596 (+) False gpr22a
XR_006250652.1 lncRNA upstream 219206 387195 ~ 388081 (+) True LOC122342795
TU36692 lncRNA upstream 224109 380551 ~ 383178 (+) True G24638
TU36686 lncRNA upstream 227843 379203 ~ 379444 (+) True G24635
TU36836 lncRNA downstream 8086 615600 ~ 615856 (+) True G24751
TU36839 lncRNA downstream 11963 619477 ~ 619696 (+) True G24754
TU36846 lncRNA downstream 15737 623251 ~ 625225 (+) True G24758
TU36856 lncRNA downstream 41995 649509 ~ 651593 (+) True G24768
TU36909 lncRNA downstream 257326 864840 ~ 933111 (+) True G24811
XM_043236911.1 mRNA upstream 167935 434343 ~ 439352 (+) True gpr22a
XM_043236912.1 mRNA upstream 167935 434343 ~ 439352 (+) False gpr22a
XM_043236913.1 mRNA upstream 167935 437183 ~ 439352 (+) False gpr22a
XM_043236781.1 mRNA upstream 246365 343592 ~ 360922 (+) True zdhhc17
XM_043237775.1 mRNA upstream 394128 205505 ~ 213159 (+) True LOC122343357
XM_043236972.1 mRNA downstream 253082 860596 ~ 863551 (+) True LOC122342832
XM_043236966.1 mRNA downstream 259682 867196 ~ 888759 (+) False LOC122342829
XM_043236967.1 mRNA downstream 259682 867196 ~ 888759 (+) False LOC122342829
XM_043236968.1 mRNA downstream 259682 867196 ~ 888759 (+) False LOC122342829
XM_043236963.1 mRNA downstream 259682 867196 ~ 888759 (+) False LOC122342829
TU36683 other upstream 233205 373527 ~ 374082 (+) True G24632
TU36680 other upstream 233463 373527 ~ 373824 (+) False G24632
TU36656 other upstream 312218 293235 ~ 295069 (+) True G24609
TU36577 other upstream 522325 83688 ~ 84962 (+) True G24555
TU36860 other downstream 46578 654092 ~ 665530 (+) True G24771
TU37077 other downstream 680798 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 1062998 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 1176778 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2507994 3115508 ~ 3117988 (+) True ninj2

Expression Profile