RNA id: TU36884



Basic Information


Item Value
RNA id TU36884
length 232
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G24792
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 604883 ~ 605114 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATATTCGGATCAACCGCTCCTATAACAATCGGCGACTTACTGTAAAGCACGCTTGATTTATCAGGCATCTTTTAGTGGGAAGATCATCAATCAGCGTCTTTAATGAAGCAAGCGATAGATGGAgatcatagttaatagttacaGGCAAACAAGCTTCCCAGCGGCCCCCCGTTGTGTTCCTCCTGAATCACGTCATGTGGCGGAGCCGAGGGTGACCTCGCTAACGTTTCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36823 lncRNA downstream 139490 406642 ~ 465393 (-) False slco1c1
TU36792 lncRNA downstream 322896 279998 ~ 281987 (-) False osbpl8
TU36803 lncRNA downstream 391637 212605 ~ 213246 (-) True G24724
TU36802 lncRNA downstream 391734 212605 ~ 213149 (-) False G24724
TU36801 lncRNA downstream 391784 212605 ~ 213099 (-) False G24724
TU36887 lncRNA upstream 7277 612391 ~ 612843 (-) True G24795
TU36888 lncRNA upstream 8013 613127 ~ 613653 (-) True G24796
TU36891 lncRNA upstream 15063 620177 ~ 620588 (-) True G24799
TU36894 lncRNA upstream 18215 623329 ~ 624257 (-) True G24802
TU36882 lncRNA upstream 21462 626576 ~ 626933 (-) True G24790
XM_043236980.1 mRNA downstream 24538 500604 ~ 580345 (-) False pde3a
XM_043236978.1 mRNA downstream 24538 500604 ~ 580345 (-) True pde3a
XM_043236979.1 mRNA downstream 24539 500604 ~ 580344 (-) False pde3a
XM_043236909.1 mRNA downstream 108015 464039 ~ 496868 (-) False slco1c1
XM_043236908.1 mRNA downstream 108164 464039 ~ 496719 (-) False slco1c1
XM_043237585.1 mRNA upstream 23951 629065 ~ 640725 (-) True aebp2
XM_043236478.1 mRNA upstream 38334 643448 ~ 774558 (-) True plekha5
XM_043236479.1 mRNA upstream 38334 643448 ~ 774557 (-) False plekha5
XM_043236462.1 mRNA upstream 38334 643448 ~ 774557 (-) False plekha5
XM_043236461.1 mRNA upstream 38334 643448 ~ 774557 (-) False plekha5
TU36783 other downstream 413641 186460 ~ 191242 (-) True G24708
TU36763 other downstream 531397 56637 ~ 73486 (-) False si:dkey-97m3.1
TU36762 other downstream 570967 28072 ~ 33916 (-) False LOC122343420
TU36754 other downstream 593782 10833 ~ 11101 (-) True G24689
TU36940 other upstream 303832 908946 ~ 933108 (-) False pik3cg
TU37001 other upstream 464046 1069160 ~ 1070096 (-) True G24875
XR_006250650.1 other upstream 1004246 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other upstream 1004246 1609360 ~ 1618298 (-) False zgc:113263
TU37319 other upstream 1048477 1653591 ~ 1654807 (-) False ccdc167

Expression Profile