RNA id: TU37076



Basic Information


Item Value
RNA id TU37076
length 482
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G24927
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1287256 ~ 1287737 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGTCTGTGGACGGAATCCACGATTTGATCTGTTATTTGTACAAAACGTTTATTTCCTATTGCTTGTCGTGTCCCAGAGCGGACAGTTTCCTGCAGTGTTTAATAAGAGCCTGTCCAGATGTGTTCTTCCTCCGCTCCAGCAGGCGGCGCAGGCGGCCTTCAGCTTCGGTCTGAGCCTCGCTTCCTCGCTGCTTTCACGACACGACGCTGGATGACAGTCACAACAACCACACGCTTAGATTATTTACTCGTAAAAGCGCTCAATCTCACCAAACGGCTGCAAACGAATGAAAACCGCTGGACTCGACTCAAGTAACTTCACGTGTCGATCACTAGTTCACTAGACACTCATGTGTCATAGAAGTTTTAAAAGTGGAGGAGGTGTTTAGTTGTTTGTTACTGCACAGCTGTGTTCAGTCTCTGGATAATAGTGTACACTGTACTGTTACCTATCTGTTAGATGGACTCAACTTTGGAGAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37075 lncRNA downstream 191 1286559 ~ 1287065 (-) True G24926
TU37073 lncRNA downstream 1790 1285205 ~ 1285466 (-) True G24924
TU37063 lncRNA downstream 34677 1250932 ~ 1252579 (-) True G24917
XR_006250762.1 lncRNA downstream 155221 1130534 ~ 1132035 (-) True LOC122343365
TU37028 lncRNA downstream 155744 1130346 ~ 1131512 (-) False LOC122343365
TU37149 lncRNA upstream 1577 1289314 ~ 1292280 (-) False ptprz1b
XR_006250581.1 lncRNA upstream 72299 1360036 ~ 1361863 (-) True LOC122342498
TU37165 lncRNA upstream 73224 1360961 ~ 1429434 (-) True G24982
TU37184 lncRNA upstream 120799 1408536 ~ 1410526 (-) True G24998
TU37187 lncRNA upstream 130449 1418186 ~ 1420262 (-) True G25001
XM_043237858.1 mRNA downstream 5549 1278010 ~ 1281707 (-) True asb15b
XM_043237857.1 mRNA downstream 9865 1273306 ~ 1277391 (-) True lmod2b
XM_043236182.1 mRNA downstream 162132 1122667 ~ 1125124 (-) False LOC122342412
XM_043236819.1 mRNA upstream 2189 1289926 ~ 1323397 (-) False ptprz1b
XM_043236818.1 mRNA upstream 2189 1289926 ~ 1323397 (-) False ptprz1b
XM_043236817.1 mRNA upstream 2189 1289926 ~ 1323396 (-) False ptprz1b
XM_043236816.1 mRNA upstream 2189 1289926 ~ 1323396 (-) False ptprz1b
XM_043236822.1 mRNA upstream 2189 1289926 ~ 1323396 (-) False ptprz1b
TU37001 other downstream 217160 1069160 ~ 1070096 (-) True G24875
TU36940 other downstream 354148 908946 ~ 933108 (-) False pik3cg
TU36783 other downstream 1096014 186460 ~ 191242 (-) True G24708
TU36763 other downstream 1213770 56637 ~ 73486 (-) False si:dkey-97m3.1
TU36762 other downstream 1253340 28072 ~ 33916 (-) False LOC122343420
XR_006250650.1 other upstream 321623 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other upstream 321623 1609360 ~ 1618298 (-) False zgc:113263
TU37319 other upstream 365854 1653591 ~ 1654807 (-) False ccdc167
TU37444 other upstream 614106 1901843 ~ 1902567 (-) False rsph9
XR_006250653.1 other upstream 755216 2042953 ~ 2088579 (-) True cald1a

Expression Profile