RNA id: TU37319



Basic Information


Item Value
RNA id TU37319
length 823
RNA type TUCP
GC content 0.40
exon number 4
gene id ccdc167
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1653591 ~ 1654826 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATTTGTGTACGGAAGTATCTGCTATTCCCATGATTTCTCTTCAGTAAAAGCTCTAAGGCCCTCCGAAATGGGTACACCAAAAACcttaaagaaagagaaaataagtgTTGCAAGCGAGATTGACCGCGTTGAAGAGCgaaaattacactgtaaaaacagcCTGGAGAGGGCAGAATTCAGACAGAGAAAAGAGCAGCTCTCAGACAACGACAGGCTGGCCCTGGACGATGAGATGACTGTATTGAATGAAAGAATACAGAAATATGAAAAGGAGCTGCAGGTGCTGAGAGGAGAGAACAGGAAGAATATGATGCTTTCGGTCGCTCTGTTAGCTATCAGCGCTCTTTTCTactacacatttatatattaagagGTATTTTTCTCTAAAGCCAGACAATGTCAGAGAATGAGATTTGGGGAGTCTGATATCCATTCATACCCATCAGTGTGCAACACTAGTTTGTTCAGGGGTTGTGAGTTTGGTCTAATCTTCATCTTGGCCTCAATGTCTTGGATTGTTGCAACTCTATAGTTTGCTTGACATGTGACAAAGAGACATTAGATTCTTGTGCATaagagagacacagaaaaatgggattatgcatgtttatatgaTCCTCATTGTGGAACACTTCACCCAATAATGACTAAATGTTTCTCTCCAGATCACTGTTTATTGCATTTCAACAGGACTAACATGCACAAAGGTGGGAGGGGCAGAGGGTGTTATtccatccaaaaataaaatttatcaacaaaatgttcagttgaaataaaaaaacagccatcaataaaatgcaatactgTCCCATGAAACTGCCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37323 lncRNA downstream 58303 1594720 ~ 1595288 (-) False selenoo2
TU37317 lncRNA downstream 70977 1580480 ~ 1582614 (-) False LOC122342802
TU37318 lncRNA downstream 75866 1577201 ~ 1577725 (-) True G25098
TU37229 lncRNA downstream 76875 1576061 ~ 1576716 (-) True G25028
TU37228 lncRNA downstream 78172 1570293 ~ 1575419 (-) True G25027
TU37348 lncRNA upstream 5798 1660605 ~ 1661388 (-) True G25124
TU37349 lncRNA upstream 7538 1662345 ~ 1662607 (-) True G25125
TU37350 lncRNA upstream 8266 1663073 ~ 1663900 (-) True G25126
TU37351 lncRNA upstream 11031 1665838 ~ 1666137 (-) True G25127
TU37364 lncRNA upstream 33551 1688358 ~ 1688894 (-) True G25133
XM_043236317.1 mRNA downstream 24936 1625295 ~ 1628655 (-) True si:ch211-214j24.10
XM_043236315.1 mRNA downstream 31710 1618977 ~ 1621881 (-) False apex1
XM_043236314.1 mRNA downstream 31732 1618977 ~ 1621859 (-) True apex1
XM_043236884.1 mRNA downstream 35295 1609360 ~ 1618296 (-) False zgc:113263
XM_043236883.1 mRNA downstream 35295 1609360 ~ 1618296 (-) False zgc:113263
XM_043236298.1 mRNA upstream 229 1655036 ~ 1658265 (-) True si:ch211-214j24.14
XM_043236299.1 mRNA upstream 229 1655036 ~ 1657597 (-) False si:ch211-214j24.14
XM_043237973.1 mRNA upstream 11838 1666645 ~ 1670146 (-) True LOC122343486
XM_043237974.1 mRNA upstream 20395 1675202 ~ 1678612 (-) True LOC122343487
XM_043237568.1 mRNA upstream 26142 1680949 ~ 1683573 (-) True rad51ap1
XR_006250650.1 other downstream 35293 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other downstream 35293 1609360 ~ 1618298 (-) False zgc:113263
TU37001 other downstream 583495 1069160 ~ 1070096 (-) True G24875
TU36940 other downstream 720483 908946 ~ 933108 (-) False pik3cg
TU36783 other downstream 1462349 186460 ~ 191242 (-) True G24708
TU37444 other upstream 247036 1901843 ~ 1902567 (-) False rsph9
XR_006250653.1 other upstream 388146 2042953 ~ 2088579 (-) True cald1a
XR_006250644.1 other upstream 647520 2302327 ~ 2375716 (-) False dock4b
XR_006250645.1 other upstream 649539 2304346 ~ 2375716 (-) False dock4b
TU38086 other upstream 1366255 3021062 ~ 3021457 (-) False LOC122342805

Expression Profile