RNA id: TU37348



Basic Information


Item Value
RNA id TU37348
length 704
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G25124
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1660605 ~ 1661388 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TttggtattgtttttttcattatatataatttccacATCAATATAATCTTTGCAGCATTAACAGACACGATTGCTTGTGACATACAGGTCATGCTCTGCACCATAGGAagaacagcaaataaaaattcaaCAGAAATAATGAAACACGTTGTCATTTTTAAGTCTGTGCaaccattttgtttttctaggGGATGTTCAAGATGGGTCCGTCTTCTCCTCCACAGCCACAAAATGGGTGAGTTCGCAAACCATCGTGGAATTTCAGCTTAAGACCGAACTCACTCAGGTATTTCTGTAAACATAACCATGTTATATTACAGCTGCACTCAGAAATAAACACATGAGATGTTACGGACCAGAGATTTAGCAGCCAATTAATACACTATTTTGATCCTTTTTACAGCAATAATGAATCACCatatacagaacacacacatacacatgatattttttttaaatacagacaaACACAGGAATGAATTCTTTAAcatcagaataaaaataaaagtacaacatCAAACAATGGTGTTCTGCCGTGGTTTTGTGCGGGTGAGGATTAGTCCATAAACTTGCGGTTCTGGTTTGCACCGAATAGAGCGACGCGGATTTCAGGCATCTGTTGTGCTATGAGGTCCAGCCTGCTCTCCAGAGTGTTAGACACTTTGATCTTCCCATCAGCATTATACAGCTCGATACCACCAGag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37323 lncRNA downstream 65317 1594720 ~ 1595288 (-) False selenoo2
TU37317 lncRNA downstream 77991 1580480 ~ 1582614 (-) False LOC122342802
TU37318 lncRNA downstream 82880 1577201 ~ 1577725 (-) True G25098
TU37229 lncRNA downstream 83889 1576061 ~ 1576716 (-) True G25028
TU37228 lncRNA downstream 85186 1570293 ~ 1575419 (-) True G25027
TU37349 lncRNA upstream 957 1662345 ~ 1662607 (-) True G25125
TU37350 lncRNA upstream 1685 1663073 ~ 1663900 (-) True G25126
TU37351 lncRNA upstream 4450 1665838 ~ 1666137 (-) True G25127
TU37364 lncRNA upstream 26970 1688358 ~ 1688894 (-) True G25133
TU37365 lncRNA upstream 27620 1689008 ~ 1692325 (-) True G25134
XM_043236298.1 mRNA downstream 2340 1655036 ~ 1658265 (-) True si:ch211-214j24.14
XM_043236299.1 mRNA downstream 3008 1655036 ~ 1657597 (-) False si:ch211-214j24.14
XM_043236318.1 mRNA downstream 5779 1653598 ~ 1654826 (-) True ccdc167
XM_043236317.1 mRNA downstream 31950 1625295 ~ 1628655 (-) True si:ch211-214j24.10
XM_043236315.1 mRNA downstream 38724 1618977 ~ 1621881 (-) False apex1
XM_043237973.1 mRNA upstream 5257 1666645 ~ 1670146 (-) True LOC122343486
XM_043237974.1 mRNA upstream 13814 1675202 ~ 1678612 (-) True LOC122343487
XM_043237568.1 mRNA upstream 19561 1680949 ~ 1683573 (-) True rad51ap1
XM_043237838.1 mRNA upstream 23741 1685129 ~ 1687279 (-) True fgf23
XM_043237589.1 mRNA upstream 32163 1693551 ~ 1697391 (-) True fgf6b
TU37319 other downstream 5798 1653591 ~ 1654807 (-) False ccdc167
XR_006250650.1 other downstream 42307 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other downstream 42307 1609360 ~ 1618298 (-) False zgc:113263
TU37001 other downstream 590509 1069160 ~ 1070096 (-) True G24875
TU36940 other downstream 727497 908946 ~ 933108 (-) False pik3cg
TU37444 other upstream 240455 1901843 ~ 1902567 (-) False rsph9
XR_006250653.1 other upstream 381565 2042953 ~ 2088579 (-) True cald1a
XR_006250644.1 other upstream 640939 2302327 ~ 2375716 (-) False dock4b
XR_006250645.1 other upstream 642958 2304346 ~ 2375716 (-) False dock4b
TU38086 other upstream 1359674 3021062 ~ 3021457 (-) False LOC122342805

Expression Profile