RNA id: TU37418



Basic Information


Item Value
RNA id TU37418
length 934
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G25166
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1788629 ~ 1789562 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGAACTTTAAATTGATTTGCAACGGCGTAATTCGCATTTGAGACCAAACCGGTTAAAGTTTTGCGGTGTTTGCAGTGGTGTGATTCGCAGAAATCGCCGAAGAGCATGACTTGTTTTGTGTATATTCATAGTATTGTCTGTAAACAAACAGGTCAGGAAAGTACTTATATTCTAATTGATTTGCAGTGCTGTATCACCACAcgagtcaatcaatcaatcatttttatttatatagcgcttttaacaacacaggttgcatcaaagcactgtacagtataatgacagggatgtataatgacgagagtgaccaatttcttattaaatgcagagacggtctctgtagtcaattcaacgatagtcactagaagttaagtgtccccaaccaagcaagccagaggcgacagcggcaaggaaacaaaaccccatgcatacagaatggagaaaaaaaaaaccttgggagaaaccagactcagttggggtcagttctcctctgaccggacgcccagcacttaacttccagttcaattttaaatgcagctgtgtcagatagtgtaaatgacttagtgtgtgtgcgtgtgtgtgtgtgtgtgcatcaggatctggtgattggtccacggggcgcatctaggtgttctggtctctgatgaacataatctctgggtgctgatccaccatctagtctggatacaaactgtgaaaacagattgagaaagagacaggactaatattagcgtagatgccattctttttatgatgtcacaagtacattgtattttaggagtagtgttcccggttccagcaaatctaagtaatgcagcctaaaaatcctttaacggatttgaataataaaaggtgtgttggtgtgttatgtgtaggctaagttaaaaagatgtgtctttaatctagatttaaactggcagagtgtgtctgctt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37413 lncRNA downstream 6604 1778072 ~ 1782025 (-) True G25163
TU37399 lncRNA downstream 34988 1752359 ~ 1753641 (-) True G25153
TU37397 lncRNA downstream 36537 1749378 ~ 1752092 (-) True G25152
TU37370 lncRNA downstream 72365 1715911 ~ 1716264 (-) True G25137
TU37365 lncRNA downstream 96304 1689008 ~ 1692325 (-) True G25134
TU37426 lncRNA upstream 18457 1808019 ~ 1808342 (-) True G25173
XR_006250585.1 lncRNA upstream 35624 1825186 ~ 1829588 (-) True LOC122342506
TU37436 lncRNA upstream 41609 1831171 ~ 1831519 (-) True G25182
TU37439 lncRNA upstream 55567 1845129 ~ 1845400 (-) True G25185
TU37443 lncRNA upstream 107324 1896886 ~ 1898257 (-) True G25188
XM_043236188.1 mRNA downstream 79832 1705449 ~ 1708797 (-) False tigarb
XM_043236187.1 mRNA downstream 79834 1705449 ~ 1708795 (-) True tigarb
XM_043237589.1 mRNA downstream 91238 1693551 ~ 1697391 (-) True fgf6b
XM_043237838.1 mRNA downstream 101350 1685129 ~ 1687279 (-) True fgf23
XM_043237568.1 mRNA downstream 105056 1680949 ~ 1683573 (-) True rad51ap1
XM_043236622.1 mRNA upstream 61681 1851243 ~ 1862194 (-) False vegfab
XM_043236621.1 mRNA upstream 61681 1851243 ~ 1862194 (-) True vegfab
XM_043236624.1 mRNA upstream 61681 1851243 ~ 1862192 (-) False vegfab
XM_043236623.1 mRNA upstream 61681 1851243 ~ 1862190 (-) False vegfab
XM_043236174.1 mRNA upstream 108841 1898403 ~ 1902663 (-) True rsph9
TU37319 other downstream 133822 1653591 ~ 1654807 (-) False ccdc167
XR_006250650.1 other downstream 170331 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other downstream 170331 1609360 ~ 1618298 (-) False zgc:113263
TU37001 other downstream 718533 1069160 ~ 1070096 (-) True G24875
TU36940 other downstream 855521 908946 ~ 933108 (-) False pik3cg
TU37444 other upstream 112281 1901843 ~ 1902567 (-) False rsph9
XR_006250653.1 other upstream 253391 2042953 ~ 2088579 (-) True cald1a
XR_006250644.1 other upstream 512765 2302327 ~ 2375716 (-) False dock4b
XR_006250645.1 other upstream 514784 2304346 ~ 2375716 (-) False dock4b
TU38086 other upstream 1231500 3021062 ~ 3021457 (-) False LOC122342805

Expression Profile