Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU38422 |
| length | 278 |
| lncRNA type | sense_over |
| GC content | 0.51 |
| exon number | 1 |
| gene id | shank3b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 4133977 ~ 4161828 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU38397 | lncRNA | downstream | 55102 | 4102730 ~ 4106259 (-) | True | G25853 |
| XR_006250582.1 | lncRNA | downstream | 375641 | 3775440 ~ 3785720 (-) | True | LOC122342502 |
| TU38219 | lncRNA | downstream | 391032 | 3770121 ~ 3770329 (-) | True | G25739 |
| TU38211 | lncRNA | downstream | 419556 | 3710024 ~ 3741805 (-) | True | G25732 |
| TU38209 | lncRNA | downstream | 453467 | 3707589 ~ 3707894 (-) | True | G25731 |
| TU38429 | lncRNA | upstream | 14616 | 4176254 ~ 4176625 (-) | True | G25871 |
| XR_006250551.1 | lncRNA | upstream | 25329 | 4186967 ~ 4188728 (-) | True | LOC122342390 |
| XR_006250562.1 | lncRNA | upstream | 31921 | 4193559 ~ 4195145 (-) | True | LOC122342421 |
| XR_006250566.1 | lncRNA | upstream | 35207 | 4196845 ~ 4198357 (-) | True | LOC122342441 |
| XR_006250561.1 | lncRNA | upstream | 38167 | 4199805 ~ 4201576 (-) | True | LOC122342416 |
| XM_043237713.1 | mRNA | downstream | 3457 | 4133977 ~ 4157904 (-) | False | shank3b |
| XM_043237748.1 | mRNA | downstream | 28494 | 4128140 ~ 4132867 (-) | False | LOC122343333 |
| XM_043237749.1 | mRNA | downstream | 28695 | 4128140 ~ 4132666 (-) | True | LOC122343333 |
| XM_043237754.1 | mRNA | downstream | 36532 | 4121442 ~ 4124829 (-) | True | si:ch73-139j3.4 |
| XM_043237750.1 | mRNA | downstream | 115070 | 4040892 ~ 4046291 (-) | True | kics2 |
| XM_043237761.1 | mRNA | upstream | 801 | 4162439 ~ 4164736 (-) | False | cdnf |
| XM_043237760.1 | mRNA | upstream | 801 | 4162439 ~ 4164736 (-) | True | cdnf |
| XM_043237739.1 | mRNA | upstream | 9043 | 4170681 ~ 4175192 (-) | True | dclre1c |
| XM_043237740.1 | mRNA | upstream | 9043 | 4170681 ~ 4174993 (-) | False | dclre1c |
| XM_043236028.1 | mRNA | upstream | 76147 | 4237785 ~ 4246176 (-) | True | tspan9b |
| TU38194 | other | downstream | 557091 | 3602358 ~ 3604270 (-) | False | LOC122342823 |
| TU38193 | other | downstream | 559387 | 3601000 ~ 3601974 (-) | False | LOC122342822 |
| TU38177 | other | downstream | 584265 | 3548226 ~ 3577096 (-) | False | LOC122342819 |
| TU38175 | other | downstream | 613894 | 3534837 ~ 3547467 (-) | False | LOC122342819 |
| TU38086 | other | downstream | 1139904 | 3021062 ~ 3021457 (-) | False | LOC122342805 |
| TU38442 | other | upstream | 103288 | 4264926 ~ 4267495 (-) | True | G25880 |
| XR_006250792.1 | other | upstream | 569586 | 4731224 ~ 4757827 (-) | False | LOC122343492 |
| unassigned_transcript_302 | other | upstream | 603215 | 4764853 ~ 4764940 (-) | True | trnay-gua |
| unassigned_transcript_303 | other | upstream | 603442 | 4765080 ~ 4765167 (-) | True | trnay-gua_1 |
| unassigned_transcript_305 | other | upstream | 1555408 | 5717046 ~ 5717133 (-) | True | trnay-gua_3 |
