Item | Value |
---|---|
RNA id | TU38876 |
length | 1035 |
lncRNA type | inter_gene |
GC content | 0.39 |
exon number | 2 |
gene id | G26196 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_056702.1 |
NCBI id | CM032071.1 |
chromosome length | 29200999 |
location | 5204113 ~ 5205305 (+) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
species | tiger barb (Puntius tetrazona) |
id | name | namespace |
---|---|---|
GO:0042613 | MHC class II protein complex | cellular_component |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU38828 | lncRNA | upstream | 81359 | 5122473 ~ 5122754 (+) | True | G26156 |
TU38827 | lncRNA | upstream | 85871 | 5117982 ~ 5118242 (+) | True | G26155 |
TU38820 | lncRNA | upstream | 92484 | 5111364 ~ 5111629 (+) | True | G26148 |
TU38817 | lncRNA | upstream | 99772 | 5104031 ~ 5104341 (+) | True | G26145 |
TU38805 | lncRNA | upstream | 121827 | 5082057 ~ 5082286 (+) | True | G26133 |
TU39034 | lncRNA | downstream | 299767 | 5505072 ~ 5505372 (+) | True | G26314 |
TU39038 | lncRNA | downstream | 303998 | 5509303 ~ 5509795 (+) | True | G26318 |
TU39044 | lncRNA | downstream | 308251 | 5513556 ~ 5513972 (+) | True | G26324 |
TU39045 | lncRNA | downstream | 309047 | 5514352 ~ 5514581 (+) | True | G26325 |
TU39053 | lncRNA | downstream | 313628 | 5518933 ~ 5519157 (+) | True | G26333 |
XM_043237966.1 | mRNA | upstream | 31703 | 5170750 ~ 5172410 (+) | True | ccdc59 |
XM_043236024.1 | mRNA | upstream | 135248 | 5053790 ~ 5068865 (+) | True | syt10 |
XM_043236022.1 | mRNA | upstream | 135248 | 5053791 ~ 5068865 (+) | False | syt10 |
XM_043237820.1 | mRNA | upstream | 238916 | 4958676 ~ 4965197 (+) | False | dmtf1 |
XM_043237821.1 | mRNA | upstream | 238916 | 4958881 ~ 4965197 (+) | True | dmtf1 |
XM_043237939.1 | mRNA | downstream | 11154 | 5216459 ~ 5224944 (+) | False | cracr2ab |
XM_043237941.1 | mRNA | downstream | 11159 | 5216464 ~ 5224944 (+) | True | cracr2ab |
XM_043237940.1 | mRNA | downstream | 11613 | 5216918 ~ 5224944 (+) | False | cracr2ab |
XM_043237848.1 | mRNA | downstream | 34098 | 5239403 ~ 5254016 (+) | True | tspan11 |
XM_043237850.1 | mRNA | downstream | 34099 | 5239404 ~ 5254016 (+) | False | tspan11 |
TU38659 | other | upstream | 261378 | 4929471 ~ 4942735 (+) | False | LOC122343397 |
TU38663 | other | upstream | 261378 | 4935929 ~ 4942735 (+) | False | LOC122343397 |
TU38543 | other | upstream | 575214 | 4550163 ~ 4628899 (+) | False | G25958 |
TU38544 | other | upstream | 575214 | 4550163 ~ 4628899 (+) | True | G25958 |
TU38370 | other | upstream | 968869 | 4232908 ~ 4235244 (+) | True | G25838 |
XR_006250627.1 | other | downstream | 149027 | 5354332 ~ 5391626 (+) | False | pcloa |
unassigned_transcript_304 | other | downstream | 193575 | 5398880 ~ 5398967 (+) | True | trnay-gua_2 |
TU39144 | other | downstream | 576639 | 5781944 ~ 5853381 (+) | False | LOC122342465 |
TU39141 | other | downstream | 645124 | 5850429 ~ 5853381 (+) | False | LOC122342465 |
TU39185 | other | downstream | 687680 | 5892985 ~ 5897771 (+) | False | LOC122342837 |