Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU39192 |
| length | 364 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC122342716 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 5904654 ~ 5913161 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39138 | lncRNA | upstream | 158160 | 5731374 ~ 5746494 (+) | False | G26388 |
| TU39129 | lncRNA | upstream | 167746 | 5728205 ~ 5736908 (+) | False | G26388 |
| TU39130 | lncRNA | upstream | 167746 | 5728205 ~ 5736908 (+) | True | G26388 |
| XR_006250580.1 | lncRNA | upstream | 168150 | 5734592 ~ 5736504 (+) | True | LOC122342489 |
| TU39131 | lncRNA | upstream | 171009 | 5728205 ~ 5733645 (+) | False | G26388 |
| XR_006250636.1 | lncRNA | downstream | 1064 | 5914217 ~ 5916247 (+) | True | LOC122342717 |
| XR_006250637.1 | lncRNA | downstream | 4351 | 5917504 ~ 5922916 (+) | True | LOC122342718 |
| TU39343 | lncRNA | downstream | 303688 | 6216841 ~ 6297920 (+) | False | G26517 |
| TU39345 | lncRNA | downstream | 303688 | 6216841 ~ 6297920 (+) | False | G26517 |
| TU39341 | lncRNA | downstream | 382980 | 6296133 ~ 6297920 (+) | False | G26517 |
| XM_043236976.1 | mRNA | upstream | 5827 | 5862607 ~ 5898827 (+) | True | LOC122342837 |
| XM_043236201.1 | mRNA | upstream | 23377 | 5877534 ~ 5881277 (+) | True | LOC122342428 |
| XM_043236202.1 | mRNA | upstream | 28525 | 5872659 ~ 5876129 (+) | True | LOC122342429 |
| XM_043236287.1 | mRNA | upstream | 42341 | 5850488 ~ 5862313 (+) | True | LOC122342465 |
| XM_043236305.1 | mRNA | upstream | 184400 | 5719009 ~ 5720254 (+) | True | tnnt2c |
| XM_043237912.1 | mRNA | downstream | 28673 | 5941826 ~ 6015837 (+) | True | tmem178b |
| XM_043236355.1 | mRNA | downstream | 131730 | 6044883 ~ 6054197 (+) | True | mkrn1 |
| XM_043236356.1 | mRNA | downstream | 142005 | 6055158 ~ 6059544 (+) | True | tmem121b |
| XM_043236369.1 | mRNA | downstream | 280356 | 6193509 ~ 6234938 (+) | False | lmo3 |
| XM_043236371.1 | mRNA | downstream | 280357 | 6193510 ~ 6234938 (+) | False | lmo3 |
| TU39185 | other | upstream | 6883 | 5892985 ~ 5897771 (+) | False | LOC122342837 |
| TU39144 | other | upstream | 51273 | 5781944 ~ 5853381 (+) | False | LOC122342465 |
| TU39141 | other | upstream | 51273 | 5850429 ~ 5853381 (+) | False | LOC122342465 |
| unassigned_transcript_304 | other | upstream | 505687 | 5398880 ~ 5398967 (+) | True | trnay-gua_2 |
| XR_006250627.1 | other | upstream | 513028 | 5354332 ~ 5391626 (+) | False | pcloa |
| TU39399 | other | downstream | 475684 | 6388837 ~ 6390927 (+) | True | vhll |
| TU39561 | other | downstream | 1312368 | 7225521 ~ 7227437 (+) | True | G26692 |
| XR_006250877.1 | other | downstream | 1456982 | 7370135 ~ 7370275 (+) | True | LOC122343893 |
| XR_006250876.1 | other | downstream | 1460701 | 7373854 ~ 7373994 (+) | True | LOC122343892 |
| XR_006250663.1 | other | downstream | 1619767 | 7532920 ~ 7558489 (+) | False | ube2h |
