RNA id: TU39736



Basic Information


Item Value
RNA id TU39736
length 578
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G26796
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 6862723 ~ 6863382 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAATTTATATCTGAAGTCTTTTgctaacaaaatattaagtgaaATATAACTGACTCACTTTGTATCCCTCTACATAAGACTCATTCCAGTAGTTGTAGATGTGATCCCAATACAGATAAAGCCATTTGCGATTGAAGCTGACATATTTGTAGACTCTCAATAGGCGACTTGGGGCTGGAACTCCTGGTGAACATTTCACAATGTTCGCTGGGTGGCCCGAGCCCAGCTCCGTTGAACGCCCGCACCTCTATGAGGTAGTGGGAGTCAGGCCGCATGTTCTCCAGGCGCGTTTGGTTAATTGTTCTGTGCACAATAATTCGAGAGGCAGCGGCCTCGTTGTCATCGTACTTCCTCCAGTAACGAATCTGGATATTAAACGAAGAGATATGAGGATTAGAGTTCTTTATTATTCCCCACTATTCCACTTAGGTCTCACCTGGTATCCGTCGACCCAGTTTGGCGGCGCCTGGTAGACCGGTAACCACCAGACCAAAGCTTCTGTAGAGGTGACCTGACGGGCGTAGACGTCTAATGGAGCCTCAGTCGGCGCTGAGAGAGATATCACATGTGTCAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU39733 lncRNA downstream 476 6860074 ~ 6862247 (-) True G26795
TU39723 lncRNA downstream 18874 6841974 ~ 6843849 (-) True G26787
XR_006250660.1 lncRNA downstream 473522 6377116 ~ 6389201 (-) True LOC122342911
TU39386 lncRNA downstream 595309 6266832 ~ 6267414 (-) True G26556
TU39377 lncRNA downstream 610075 6207174 ~ 6252648 (-) False arhgef39
TU39740 lncRNA upstream 20519 6883901 ~ 6956375 (-) True G26799
XR_006250751.1 lncRNA upstream 303424 7166806 ~ 7189549 (-) True LOC122343305
TU39779 lncRNA upstream 350952 7214334 ~ 7220911 (-) True si:dkey-261e22.4
TU39780 lncRNA upstream 456120 7319502 ~ 7319725 (-) True G26832
TU39813 lncRNA upstream 509791 7373173 ~ 7373595 (-) True G26846
XM_043237094.1 mRNA downstream 69288 6792367 ~ 6793435 (-) True akap14
XM_043236394.1 mRNA downstream 78688 6776299 ~ 6784035 (-) True irf5
XM_043237696.1 mRNA downstream 104535 6756012 ~ 6758188 (-) True opn1sw1
XM_043237512.1 mRNA downstream 112474 6740893 ~ 6750249 (-) True mdm1
XM_043236564.1 mRNA upstream 70711 6934093 ~ 6940296 (-) False gxylt1b
XM_043236563.1 mRNA upstream 70711 6934093 ~ 6940296 (-) True gxylt1b
XM_043236565.1 mRNA upstream 71204 6934586 ~ 6940296 (-) False gxylt1b
XM_043236566.1 mRNA upstream 77064 6940446 ~ 6950897 (-) True yaf2
XM_043236513.1 mRNA upstream 88510 6951892 ~ 6954640 (-) True zcrb1
TU39663 other downstream 123128 6737641 ~ 6739595 (-) False il22
TU39610 other downstream 501280 6350503 ~ 6361443 (-) True msrb3
TU39270 other downstream 922724 5938055 ~ 5939999 (-) True mrps33
TU39262 other downstream 949185 5909473 ~ 5913538 (-) True G26462
TU39180 other downstream 1009357 5850404 ~ 5853366 (-) True G26414
TU39958 other upstream 691733 7555115 ~ 7558453 (-) True G26951
TU40263 other upstream 1384529 8247911 ~ 8249225 (-) False LOC122343432
TU40311 other upstream 1597124 8460506 ~ 8468028 (-) True G27232
XR_006250786.1 other upstream 2030802 8894184 ~ 8941271 (-) False LOC122343470
XR_006250788.1 other upstream 2032410 8895792 ~ 8941271 (-) False LOC122343470

Expression Profile