RNA id: XM_043236701.1


Basic Information

Item Value
RNA id XM_043236701.1
length 2636
RNA type mRNA
GC content 0.48
exon number 4
gene id wnt7ba
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9504080 ~ 9522033 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCACCGACCCAAAATCCCTAAAACCGACCGTCAGCCCGCGGCGGGGAGCACACTCTGAATTAGCCTGTCTCGCGCAGGAGATGACGGATCGTGTCTCCGCGCCCGCAGCTCACCGAGCAGCAGCGTAAACCCCCAGAAGTCCGCTTTCTCCACGCGCTCTCTTCAATGTCACCATGCGCAGCATCTCACCCTGCGGTGCGCTGCTGTCAGTCTACTACCCCCAGATCTTCCTCATCCTCACCAGCGGCAGCTACCTGGCTTTGTCTTCAGTCGTGGCTTTGGGCGCGAACATCATCTGCAACAAGATCCCCGGCCTGGCCCCCCGACAGCGCGCCATCTGCCAGAGTCGCCCAGATGCCATCATCGTCATCGGGGAGGGCGCTCAGCTGGGCATCAACGAGTGCCAGTATCAGTTCCGCTACGGACGGTGGAACTGCTCTGCCCTTGGCGAGAGGACCGTCTTTGGGCAAGAGCTGAGAGTAGGTAGCAAGGAGGCTGCATTTACCTACGCCGTCACGGCAGCAGGTGTTGCCCACGCTGTGACAGCAGCCTGCAGTCAGGGCAACCTGAGCCACTGCGGCTGTGACAGAGAAAAGCAGGGCTATCACGACCAGGAGGAGGGATGGAAATGGGGCGGCTGCTCGGCAGACGTCAAATACGGAGTGGAGTTCTCCAGGCGCTTTGTGGACGCCcgggagattaaaaaaaacgcaAGGAGACTAATGAACCTGCACAATAACGAAGCAGGAAGAAAGGTTCTAGAGGAAAGGATGAAGCTGGAATGTAAATGCCATGGCGTATCCGGCTCATGTACCACAAAAACCTGTTGGACAACTCTGCCGAAGTTCAGAGAAATCGGCTACATCCTTAAGGAGCGTTATGCCACTGCGGTTGAGGTGGAGGCCGTGAGAGCCACGCGTTTTCGCCAGCCGTCTTTCCTGCGTCTCAAGCAGTCCCGTGGGTACATAAAGCCCACCGACACAGACTTGGTTTACTTGGAGCGCTCGCCCAACTATTGCGAGGAGGACGCTGTGACGGGGAGCGCGGGAGCGAGAGGGCGGCTGTGTAACCACACGTCCCCTTACACGGACGGCTGCAACCTGATGTGCTGCGGCCGGGGCCACAACACCCATCAGTACACACGCGTGTGGCAGTGCAACTGCAAGTTCCAGTGGTGCTGCTTCGTGAAGTGTAACACCTGCAGTGAAAAGACGGAGGTGTTTACCTGTAAATGAGCGAGTGGTAGAGTTCAAAAGACAAGAAAGAACGGCGAGAAGCCAGCGGAAAGAAACAGGAAGTGTTAGAAACGGAAATGGAAGTGGCTTCGTTTTGCACATCAGGCAGTCTTTATGCAAGAAAGCCCCCGTTGAAGGAGACTGGGATGAATAATGAAGATGCCGGAACTTCAGAGGAAAATGCACTGACCTCAGactgatttgttttgtgaattCATGCAAACATATGGACGCTACATATGCAGTGCAAGGCTTTTTTTTAGATCTCACATTCTCACAGACTCGAGAAAGTCAGCTGGGATTGACTCAATAGTCCTACTGGACGGTCTAAACCGCCCAGCGATCTTTTTCAAATTAAGGCAAGAAGAACTGTCCCTACGGTAGTTCAAGAGGAAAGGCGTGCCGCAACTTTGCAACTCTGGAAAACGCTGGAAAGCTTCAGTCACACTGTATCTGTTTGAACACTGAAAAACATGacctttttccttctctttggAGAAAAGTCTGAATATGTTCATACTGTAGATGTCTCATAATGGTACACAGACGTATGAACTTCTATCATTGCTACTGATCTGTTGCTTCCAAAACTCAAACCCAAACAGCACAGGACGTTGCGTATTTAAAAAGAGCTCCGTTTGCAGTTTACCGATTAAGAAACGCGGTCAACTCCTTTCTACACTTAAGAAACCATCATTTTGGTGAATACGCTGCCAATCGCTGCACTGGTGAGCTTTAAGTGAGCGAAAACCAATTGTGTTTTTTACGAGGAGAGAAGCTTCCTCAGTCATCTAAGACTTGGCCATGTATGCGGCAATGCTCGAAACGTGAGTGTGTAAATGCGTGGGAAcgaaagagagagcgagcttTTTCATACTTAACAGAAATGTGACCCACCACCGTTTGAGTGACCAAACCATTCCCACGAATGCCAGAGACATGGGATTCCACATCACTGCTCCGGCGTGCACAAAGTCTAGTTATATTCCGCCTGAGCCAATCGACCATACAGCTATTGGTCTGAAAACGGTTGAAAGGTCACTGGAAATATTTTACGTAgcagttttttaaaatcaaaattgttTATACGAGTTATATGGCTGgtaaatttgttaaaatatatttttttatgtagagAATATGGCACTTTATGTCAGGTATATTCAGAGTAATTATTGATACTGTTttctttgtcatgtttttattgtttaattacagGTCTACCATTTTTGTCCTGGTTTAATTATGTAAGCTTTTTTCTTGAATTCAAGTTTGATAAGAAACCATCTCATCTTTTTGTTGCCTGgatgtatttatactttttttttttggcaaagatTTACACTAAAAATCTCTAGACAAATAAATGGATCGAAACTGTTTGGATCAAATAGCTCAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU40618 lncRNA upstream 6739 9504080 ~ 9507928 (+) True wnt7ba
TU40610 lncRNA upstream 19014 9495434 ~ 9495653 (+) True G27407
TU40609 lncRNA upstream 24975 9489070 ~ 9489692 (+) True G27406
TU40608 lncRNA upstream 27091 9487361 ~ 9487576 (+) True G27405
TU40607 lncRNA upstream 29012 9485293 ~ 9485655 (+) True G27404
TU40744 lncRNA downstream 14577 9536610 ~ 9537087 (+) True G27498
TU40761 lncRNA downstream 32927 9554960 ~ 9556718 (+) True LOC122342620
XR_006250619.1 lncRNA downstream 32940 9554973 ~ 9556217 (+) False LOC122342620
XR_006250603.1 lncRNA downstream 138454 9660487 ~ 9673677 (+) True LOC122342587
TU40854 lncRNA downstream 164466 9686499 ~ 9872003 (+) True G27562
XM_043237934.1 mRNA upstream 118910 9381542 ~ 9395757 (+) True cfap54
XM_043237914.1 mRNA upstream 140849 9355967 ~ 9373818 (+) False ncaph2
XM_043237913.1 mRNA upstream 140849 9366507 ~ 9373818 (+) True ncaph2
XM_043237906.1 mRNA upstream 181619 9324900 ~ 9333048 (+) True LOC122343440
XM_043236575.1 mRNA downstream 23652 9545685 ~ 9554560 (+) False slc26a4
XM_043236573.1 mRNA downstream 23654 9545687 ~ 9554560 (+) True slc26a4
XM_043236574.1 mRNA downstream 24285 9546318 ~ 9554560 (+) False slc26a4
XM_043236981.1 mRNA downstream 34796 9556829 ~ 9576961 (+) True slc26a3.2
XM_043238006.1 mRNA downstream 59536 9581569 ~ 9584512 (+) True bik
XR_006250785.1 other upstream 119939 9381542 ~ 9394728 (+) False cfap54
TU40537 other upstream 332435 9168776 ~ 9182232 (+) False G27360
XR_006250548.1 other upstream 971955 8533816 ~ 8542712 (+) False etnk1
TU40115 other upstream 1265444 8247912 ~ 8249223 (+) True G27079
TU40013 other upstream 1376228 8137738 ~ 8138439 (+) True G26993
TU40764 other downstream 55282 9577315 ~ 9578574 (+) True G27508
TU40736 other downstream 65286 9587319 ~ 9590318 (+) True G27490
TU40943 other downstream 636126 10158159 ~ 10203768 (+) False G27629
TU40942 other downstream 676613 10198646 ~ 10203768 (+) True G27629
TU40966 other downstream 843719 10365752 ~ 10367912 (+) False lamtor4

Expression Profile