RNA id: XM_043238031.1



Basic Information


Item Value
RNA id XM_043238031.1
length 615
RNA type mRNA
GC content 0.45
exon number 5
gene id zgc:193726
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10355711 ~ 10363566 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGCAAGGAGCTGTATTTAAGTTAAACCCAGCTCCGATCAGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTGCACTCTTGGGTTCCCCGTGCTTAATAACACGAGCAACTCTTACACGAAGGCGTTCCCCAACGTCACAGAGAGGAACATCACCGTGGATGTTCAGAAGACCAATCAGACCAGTTACCAACTGCCGATGTACTTTGCTCCTGAATTAATCCCaCCAGAAGTACTGACAGATCTTCCAAATCTCCAAATGGCGGCAGCACCAGGATGTTCTTTGGCTACCTGTGCCATACAAACTCTAGCCCACAGGATGCAGATCGGGAATGAGAAAGCAGGGGACAGCGCAAGTGATGCATGGGGGCTCGGGAAAAAATAAGACATGTATAGGCGCATAAAGGTTACTTTTATTTGATTGCTTTGAAGACACATTTAATCGTAAAATCTCTTTCCATTGAGCCTCAAGATTGAGAGCAATTATAGATATGTACGCGATCGATGCTACTCTAATGTCATCTCTTTTcacaagtgaaaaataaaatcgttTGTATTACCATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250795.1 lncRNA downstream 9133 10322734 ~ 10349291 (-) True LOC122343524
TU40941 lncRNA downstream 220368 10083419 ~ 10138056 (-) True G27628
TU40939 lncRNA downstream 342670 10015182 ~ 10015754 (-) True G27627
TU40887 lncRNA downstream 613637 9697696 ~ 9744787 (-) True G27581
TU40837 lncRNA downstream 704047 9636949 ~ 9654377 (-) True G27549
TU41330 lncRNA upstream 29056 10389447 ~ 10389805 (-) True G27883
TU41345 lncRNA upstream 86044 10446435 ~ 10507553 (-) False G27894
TU41344 lncRNA upstream 123865 10484256 ~ 10507553 (-) False G27894
TU41360 lncRNA upstream 124531 10484922 ~ 10486071 (-) False cacna2d4a
TU41343 lncRNA upstream 129620 10490011 ~ 10507553 (-) False G27894
XM_043238034.1 mRNA downstream 1255 10355711 ~ 10357169 (-) False zgc:193726
XM_043238027.1 mRNA downstream 38251 10301342 ~ 10320173 (-) True drd4-rs
XM_043238022.1 mRNA downstream 67551 10275513 ~ 10290873 (-) True cdhr5-rs
XM_043238021.1 mRNA downstream 67551 10277691 ~ 10290873 (-) False cdhr5-rs
XM_043238014.1 mRNA downstream 94078 10201993 ~ 10264346 (-) False cacna2d1a
XM_043238030.1 mRNA upstream 3714 10364105 ~ 10365584 (-) True atp6v1f
XM_043238025.1 mRNA upstream 13237 10373628 ~ 10381711 (-) True dennd6b
XM_043238026.1 mRNA upstream 15446 10375837 ~ 10381715 (-) False dennd6b
XM_043238029.1 mRNA upstream 37700 10398091 ~ 10403758 (-) True fam3c
XM_043238018.1 mRNA upstream 44208 10404599 ~ 10413735 (-) True si:dkey-159a18.1
TU40990 other downstream 1219 10355711 ~ 10357205 (-) False zgc:193726
XR_006250565.1 other downstream 1058245 9271972 ~ 9300179 (-) False uhrf1bp1l
XR_006250745.1 other downstream 1349120 9004260 ~ 9009304 (-) False klhl42
XR_006250786.1 other downstream 1417153 8894184 ~ 8941271 (-) False LOC122343470
TU41528 other upstream 1061678 11422069 ~ 11424083 (-) False ppfia2
XR_006250735.1 other upstream 1066106 11426497 ~ 11545812 (-) False ppfia2
TU41650 other upstream 1654240 12014631 ~ 12015767 (-) True G28093
TU41785 other upstream 2121529 12481920 ~ 12489156 (-) False cpm
TU41786 other upstream 2121711 12482102 ~ 12489156 (-) False cpm

Expression Profile