RNA id: XM_043238034.1



Basic Information


Item Value
RNA id XM_043238034.1
length 534
RNA type mRNA
GC content 0.43
exon number 4
gene id zgc:193726
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10355711 ~ 10363566 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCTGAGAATAAACCCAGCTCCGATCTGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTACACTCTTGGGTTCCCCGTGCTTAATAACACGAGTGGATCCCATATGGAGACTTTAATCAATGCCACAATAGGGAACTTCACAGTGTATAATGCGACCAAAGAAcaaaggAGTCCTTTCATCCTGCCGGGGACAAGAGGTATAGGATGTGCACTGGCTACCTGTGCCACAGAAAATCTGGTCGACCGCATGCAGACTGGGGATGAGAAAGCAGGGGACCGTGCAAATGATGCATTGGGGCCTGGGAAAAAATAAGAGCATTGcttatttgattgttttcagACACATCTATTTGTCttggtcattttaatttgacattttattattcatgcaaagagagaaaatacaGAATTATGTTTTCAACATATTAATGTCATCACCACAGTGCACACTaatgtagaataaaatattattttttccca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250795.1 lncRNA downstream 6420 10322734 ~ 10349291 (-) True LOC122343524
TU40941 lncRNA downstream 217655 10083419 ~ 10138056 (-) True G27628
TU40939 lncRNA downstream 339957 10015182 ~ 10015754 (-) True G27627
TU40887 lncRNA downstream 610924 9697696 ~ 9744787 (-) True G27581
TU40837 lncRNA downstream 701334 9636949 ~ 9654377 (-) True G27549
TU41330 lncRNA upstream 32278 10389447 ~ 10389805 (-) True G27883
TU41345 lncRNA upstream 89266 10446435 ~ 10507553 (-) False G27894
TU41344 lncRNA upstream 127087 10484256 ~ 10507553 (-) False G27894
TU41360 lncRNA upstream 127753 10484922 ~ 10486071 (-) False cacna2d4a
TU41343 lncRNA upstream 132842 10490011 ~ 10507553 (-) False G27894
XM_043238027.1 mRNA downstream 35538 10301342 ~ 10320173 (-) True drd4-rs
XM_043238022.1 mRNA downstream 64838 10275513 ~ 10290873 (-) True cdhr5-rs
XM_043238021.1 mRNA downstream 64838 10277691 ~ 10290873 (-) False cdhr5-rs
XM_043238014.1 mRNA downstream 91365 10201993 ~ 10264346 (-) False cacna2d1a
XM_043238031.1 mRNA upstream 1255 10358424 ~ 10360391 (-) False zgc:193726
XM_043238030.1 mRNA upstream 6936 10364105 ~ 10365584 (-) True atp6v1f
XM_043238025.1 mRNA upstream 16459 10373628 ~ 10381711 (-) True dennd6b
XM_043238026.1 mRNA upstream 18668 10375837 ~ 10381715 (-) False dennd6b
XM_043238029.1 mRNA upstream 40922 10398091 ~ 10403758 (-) True fam3c
XR_006250565.1 other downstream 1055532 9271972 ~ 9300179 (-) False uhrf1bp1l
XR_006250745.1 other downstream 1346407 9004260 ~ 9009304 (-) False klhl42
XR_006250786.1 other downstream 1414440 8894184 ~ 8941271 (-) False LOC122343470
XR_006250794.1 other upstream 1255 10358424 ~ 10363566 (-) True zgc:193726
TU41528 other upstream 1064900 11422069 ~ 11424083 (-) False ppfia2
XR_006250735.1 other upstream 1069328 11426497 ~ 11545812 (-) False ppfia2
TU41650 other upstream 1657462 12014631 ~ 12015767 (-) True G28093
TU41785 other upstream 2124751 12481920 ~ 12489156 (-) False cpm

Expression Profile