RNA id: XM_043237602.1


Basic Information

Item Value
RNA id XM_043237602.1
length 6523
RNA type mRNA
GC content 0.56
exon number 30
gene id kmt2e
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11653470 ~ 11683862 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGGGGTGAGCGGGGGGAGGCGGAGCCACGGCACTTCTGCCAGGGCCGCCATTTTTGCACAAGGAAAAGAGACAGGATTGAAGGGATCCAGTTTCTAACTGTCGGCACAGATATGGACAAAATTATCGCGTTTTAACAGCCTCGAAGCGCACGCTTGGATAGGGGCAGCACGAGGCGAAACGCGAGTGCGGAGCGGCGCGATCTGTAAAGCTTTGTTACACATCCGCAGTGGAGAGCGAAGTATTGTTTTGGTTGTGTGGCGGATCAGGCGGCGGGGTCTCACCCGAGTCCCCCGTGTCTTTATTCACAGTTATTACAGTGGACATCAACGGCCTCGTGGATGCACTTAGATGTGTGCAATGAGTGCTGTGGCTGACATGCCTCAGTGTTTTGGATTGCTGTGCTCTGGACTCAGTAGGACAAGAGACTCCCAGCACAGAACGTCATGAGCGTAGTCATCCCAGTAGGGGTGGACACGGCCAACACCTCATACCTGGACATGGCTGCAGGCTCAGAACCAGAATCTGTGGAGGCGAGCTCTGTGGTAGTTGAGAAGTCCAGCTACCCTCACCAGATTTACAGCAGCAGCTCCCACCACTCCCACGGCTACATCGGTCTGCCTTACGCCGACCACAATTATGGGGCGCGACCCCCACCCACCCCGCCGGCGTCCCCGCCTCCCTCGGTGCTGATCCGGCCGGGCGAGGGTTTGTTTGTGTCCGGGGGGCGGCCGGGCGAGAACTTGTTCGTGCCGGGCGGGCAGGACGAGGCGTCGCGTGGCACCACGCTCAGCACCTCGGAAGACGGCAGCTACGGTGCTGACATCACGCGCTGCATTTGCGGCTTCACCCACGACGACGGCTACATGATCTGCTGCGACAAGTGCAGTGTGTGGCAGCACATAGACTGCATGGGGATCGACCGGCAGCACATTCCCGAGACCTACCTGTGTGAACGCTGTCAGCCACGCACCCTGGACCGAGAGCACGCCATCCTGCTGCAAAccaggaagagagagaacatgtctgACGGGGACACCAGTGCTACAGAAAGCGGGGATGAGGTTCCACTAGAGTTGTACACGGCGTTTCAGCACACCCCCACCAGCATCACACTCACAACAGCACGTCTCGGCAACAAACAGGCTGATAAGAAACGAAAGAAGAGTGGAGAAAAGGAGCCCCCGGCTACAGCCAGGGCCAAGAAGTCATTCCGTGAAGGCTCTAGAAAATCATCTAGAGTAAAGGGCTCAGCTCCCGAGTGTGAGCCGATAGATCCTCCCTCTCTTTGGGAGAATAAGATGAAGTCGTGGATGGAGCGCTATGAGGAAGCCAGCAGTAACCAGTACAGTGAAGAAGTGCGGATACTGCTAAGAGTAAAAGAAGCCAGAGATGGCAAAACGCTagcctacaacacacacaccgcaGCCTTCAAACCACCCGTAGAGAGTCACGTACAGAAGAACAAGCGCATTCTTAAGGCTGCTCGGGACTTGGCTGCCGATTCGCTCATAATCGAGTACAGAGGGAAGGTCATGCTGCGACAGCAATTTGAAGCCAATGGTTACTTCTTTAAGAGGCCGTACCCTTTTGTATTGTTCTACTCTAAGTTTGACGGTTTGGAAATGTGCGTGGACGCGCGGAGCTTCGGAAACGAGGCTCGATTCATTCGTCGCTCCTGCACACCTAATGCGGAGGTGCGGCACGTAATCGAGGATGGCATgctgcatttatacatttactcTCTGAGGTCCATCTCCAAGGGCAGTGAGATCACCATTGGCTTTGATTATGACTACGGTAGCTGTAAATATAAGGTGGACTGTGCGTGTGTGAAAGGCAATCAGGATTGCCCTGTGCTCAAACATAACTTGGAACCCACGGAGAATCTGGGCTCTAGCACGCGACGGCGCGGCCGCAAGGACAAAGAACCGTCGCGAGACGAGAGCGGACAGAACCAGAACCTCACGATGGACTGTGACGGGCCCAAGAGCAAATCTCTCAATGACGCCAAACAGAGAAAACTCTCCCCTCTCCGGCTCTCCATATCTAACAATCAGGATCCTGAGTTAATAGAGGATCTAGAAGAGAAAACCTCCGTTAGCAATGAAGTAGAGATGGAGTCAGAGGAGCAGATTGCagaaaggaggaggaagatgGGCAGCCCGGCAGAGGAGTCCCATCGTCACGGCGCAGGGGCTTCCTGCTGCAGAGCTCTGAGAAACAAGGAGACACGTGAAGAGAGGAAGATGGAGGCCATTCTGCAGGCATTTGCTCGTatggagaaaagagaaaagcgGAGGGAGCAGGCGTTGGAAAGGATCGGCACCAAAGGGGAGGTTGGCGGACGCAGCGAGATCAAGGAAGAGCCTCCTGCTACACCAGAGGCCGAATCTCCTGCCCCGTTACAGCCCTTGCTGGAGGTAGTGAAGGAGGAGCCTTGTCTGAAGCCAGCGAAGGTGAGCCGgaacaaacagagaaagagcTTCTCGCGGAACCGAACGCACATCGGACAGCAGAGGCGGCGAGCGCGAACGGTTAGCACCTGCTCCGACTTGCCACCCAGTTCCCCCGGTGAGACATTAGAGCCCTTAACAACAGAGACTAATGATGGAGAGACTCCTTTGGCCCCTGAGGCCGACGCTCCGCCGACACATGCCCCTGACACCAGCCCGCCCCACAGCGGATCGCCCTCCCCGGCCTGCCGCAGTGGACAGAAGTACCCCAAAACTAAAAAGCACTTAGTGAGCGAGTGGATGGGTGTTGACAAACAGGAACGGTGTGCTTCGCGAACTCCGGAGCCGCCTCCTGAGAGGCCTTTGCGGATCAGTAGCGATCCCGAGGTCTTGGCCACGCAGTTAAACTCTCTACCGGGCATGGCCTGCAGTTCACACGTCTACAGCACACCTAAACACTACGTCCGCTTCTCATCTCCTTTTCTGGCCAACCGTAGCCCCAGCACGCTGGGAGTGCCCACGGGCCGGCGGCGCTCGAGGGAAATGCCTGAGACGCCAACTACCACTGGGTCCTGCAAGAAGCGCTGGCTAAAGCAAGCTTTAGAAGAGGAGGGCTCCACCAGCCCAGGTGGAGGTCGCCCTTCTCTGCTGATGCCTAGTGAGAGCCCTCTCAGCCCTTCTATAAACGGCGAGTCCTACAGCCCTCTACCCCTCAACGGCAGTTGCTCACTACCAGAGTTGCCTACCCCGTTGAAGAAAAGACGCTTATGTTCACTCGATCCTTGTATGTCCGAGACTTCCACCCCTTACGGGTCTCCTTGTGCCACCCCGACCCGAACAGAGTCGACAGAAGCACCAGGCACGCCCCTTCTGCTTGCCACGCCACCTCGTTCAAGGCCAGAGGAACCCAGTACTGAGCCCACGACACCCTTGCAGATTCCCAGCCACCCTCTTCCACAAGAGAGCGAGTCATCTATGGACAGCTCTCCAGATGGAAGCCGGAGGCCCAGTACACAAGACGTTGAGCGACCTCCTTCGCTGTTGGCATCTCCCAGCGTGAGAACTGCAGGCTCTGGAGCGACTCCACAGGAAACAACAAAATCTATGGTGTCTCTGAGTCCTCAGCCTTCCCACGCTGAGCCCCAGGACGTGGCAGTAGATGAAGTCATGGAGGCTGACGGTGGTGCTTCAGAAGCTGCCTCCGCGCCCGAGACACCGGCGTCCTCTTACCCTCCCTGGATGAAGAGTCCAGACCGAGGAGGCCTCTCGTTTTCCCCAGTGAACTCTAATCTGAGGGACCTCACCCCTTCTCACACCTTGGAGATGGGGGCGTACAGGCCGGATTCAGCCTCCGCTGGCCCCTTCAGTGAGGCGGCGCCCTTTTATTCCTGCAGTGAGGAGAGCAGCGGCGTGACCTTTACTCGCTCGTTGAGTGGCGATGGCACAGGGGAGGGAGGTGCTGCCAAGAACCCACAGAAGAAAAAGGTGTCTCTCTTGGAGTACAGGAAACGTCAGCGAGAGGCACGGCGAAGTGGTTCCAAGGGAGAGTGTAGCTCCCCTGTGTCCACAGTGCCACCAGTAGATGTTTTCCCAGTCGCAGTGGAAGTGGCCCCTGAGCCTCCTGTTCTCCCAGCAACACCAACCCCCAGGACCCCGCAGCACAGCGAGGAGCCAGACGGCCCGCCTCAGGGGGAGAGAGACGGAGAAGGGCAGTGGACATCTTCAACATCAGTAGAACAGGCCAGGGAGCGTAGCTACCACAGGGCCTTGTTGTTGAGTGACCATCGTAAGGATGCAGacAGTGGAGAGTCAGAGGGCGGCGACTCCCAGGTCAAGGATTGTCCTTCTCCCAAGAGCTGCAAGAGTCCCTCGACGCATGCACCTTGTTCTCCAGCACCCCAGACGGCGCCTCGACCATCCAAGGAGGAAGATGGTGAAGCGCAGCCCCGTGGTCCTTCTCAGCCTCAGGCACTGTCCGTCCAGCCGCCCAGCACCAAGACTTCGAGCTCCAAACCAGCCACACTGACGCCCAGCAAGCTCCACTGCTCCTCGCAGAGTCACTACGCTGGACCCTCGCTCCTGCACTCTCCCAAAGCGCAACCCCAAGGCTCACCTTACCGCGGCCAGCGAGCCTTCCTGACAGCTCAGCCTCAGAACCAGCCTCAACCCCAGGCTACGTCCGGCCCGGCCACTTTCCCTCAGTACACCCAAAACGCCCCACCGCCGCCACCCCCTCCCCCAGCTCCACCCACCTCGGCTTCCTACTTCCCGCTCAGCCTGCCGCCGCCGCCTCCGCTTCCTGCGTTCAAGCCAGCGTCGCCCTTCCCCGGTTCCCAACCTCTCCTACAGACCCACCATGCGTTGCATTACCAGAGCAGCGCCGCCCCCCCGCCGCCCCCTCCTCCACCTCCCCACCCGCAACCCGGTCCCACCTTGCTGCACGTCAACCTGCAACCTCCTTCGATGCAGCAGCATCAACTTCTGCTGAGCTCTGCCCCCCCCGCCTCCCCTCCCCCTCAGGCACAGAGTTCCCAGCAGCCTCCGCCCAATAGCGGCACtctcctgtcaatcaaacaagGACCACACCCGCCCCTTCCGCCCCTCCCTCCTACCGCACCTCACCCGTTCCAGAACATGGGTGGCTTTCAAACCGCTCTACTACACCAGTCTGCACCAGCCAACCCCTCAGTGACCCCATCCACTTATCAACAAACTGTATTACCCCCGCCTCCGCCACCACCTCCCCAACAAACTCCTCCCACACAGACCCCGCCCAACCCGAGCGTCTCGCAGATCGCCGGCGGTAACCGAGGACCTGCCCCTTCGTCCGCCCCCTTTCACAGCACCGGCTACTTGGGCACAGGATGGCACTGACCACACCCACTCAACCCCGCCCCCCCAGACAAACTCACTCAGAGAGGGGTGGAGCTACATCGTGTAACATAGGCAACACAGCAccactgtaaatattttctatgtaCCTTTTCACAAAGGCTAATGGAAACCGGTGGGGGGGAAgggtacattttaaaaaaagataaacgcGAACTGTAAAAGTAGACTTTGTGTAAAAGATGATGGTTAATGAACCCTGGTGCTCATCACTTACCCAGAATCCCCCACACCTCTCTCCTTCCCATAATCTTGTACTGCCATCCTGTCTTTTCCAGacgtcttttttttatttttaatgtttttattcattttaaccgCCCTCTTCCCGTTGAGTCCTTCCCTCTTTCCTCCCGGTGCAGTGCAATGCCATGGGACATTCCAGTTTGCTCCttacctttttttcccccccctgTTCTTCCCGTTTCTCACTGTTTTTcatctgttgtttgttttatctagTGGCTCATTATATAGCAAAAAGATTTTGTATagagaaaaaaagtacagaattattattttttttattcctccaTGTAACAAAAATATCTGTGCACCGCTGCAGAAATTCAGAGGAGACCTTTCTGATAGGCCGCTTCACTGCCCCAGGAGACTGCACTTGTGTGAATGAGCGAGTCTGTGTGCTTGAGTGTCTGTTTTTAAGCGGAAGGGAGCGTGTATGCTTGCGTGCCGCCCGCGTCCGTGCGCATGTTTGAAGTGCGCACGAGAAACGGAAGGCAAATACGGCACAGACAGATGCGTGCTGTTCTCTGTGGCAGCTTTAGAAAGAGAGGTCCTTCCTGTAGGGGGTAAGcggtttatttttgaatatcaATGGTTATTTGTAGaaagtgtaatttaatgtaTAGGTGGTTACTCCAGCTTTCTCCAGAAACAGTTGTAAATATtggcttcttttcttttctatgcTTGTATAATTCGCTCCCATCCCCATTTTGGAATATGGTTGTAAATACAAGCGCTCTTGACAAAAACGCTGAATGTTTCTGTGACTGTAgcactatttttatttcttcctctctggtttatttttttttttactgtttgtgtgtgagtgtatgtgtgtgtgaaggacagAGGCTCACAGACACAGCACTGGTTGGCTATTTTCATGGTTCATTATAATAAATCACTGTAATGACAGTTTTATACCAA

Function

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09189 MLL5; [histone H3]-lysine4 N-trimethyltransferase MLL5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250738.1 lncRNA downstream 5047 11618450 ~ 11648423 (-) True LOC122343274
TU41527 lncRNA downstream 230884 11422069 ~ 11422586 (-) False ppfia2
TU41512 lncRNA downstream 234106 11415100 ~ 11419364 (-) False ppfia2
TU41464 lncRNA downstream 393987 11126502 ~ 11259483 (-) False G27974
TU41551 lncRNA upstream 1870 11685732 ~ 11688800 (-) True G28029
TU41482 lncRNA upstream 97097 11780959 ~ 11804910 (-) True G27987
XR_006250628.1 lncRNA upstream 110421 11794283 ~ 11820297 (-) True LOC122342677
TU41559 lncRNA upstream 114704 11798566 ~ 11815305 (-) False G28033
TU41558 lncRNA upstream 129898 11813760 ~ 11815305 (-) False G28033
XM_043237642.1 mRNA downstream 35981 11607310 ~ 11617489 (-) False orc5
XM_043237643.1 mRNA downstream 36094 11607310 ~ 11617376 (-) False orc5
XM_043237641.1 mRNA downstream 36094 11607310 ~ 11617376 (-) False orc5
XM_043237645.1 mRNA downstream 36485 11607310 ~ 11616985 (-) False orc5
XM_043237644.1 mRNA downstream 36926 11607310 ~ 11616544 (-) True orc5
XM_043237629.1 mRNA upstream 7260 11691122 ~ 11710502 (-) False kdm7aa
XM_043237630.1 mRNA upstream 7260 11691122 ~ 11709523 (-) True kdm7aa
XM_043236999.1 mRNA upstream 101484 11785346 ~ 11792920 (-) True cd36
XM_043237927.1 mRNA upstream 146895 11830757 ~ 11840052 (-) True nup107
XM_043236844.1 mRNA upstream 158103 11841965 ~ 11996639 (-) True magi2a
XR_006250735.1 other downstream 107658 11426497 ~ 11545812 (-) False ppfia2
TU41528 other downstream 229387 11422069 ~ 11424083 (-) False ppfia2
XR_006250794.1 other downstream 1289904 10358424 ~ 10363566 (-) True zgc:193726
TU40990 other downstream 1296265 10355711 ~ 10357205 (-) False zgc:193726
XR_006250565.1 other downstream 2353291 9271972 ~ 9300179 (-) False uhrf1bp1l
TU41650 other upstream 330769 12014631 ~ 12015767 (-) True G28093
TU41785 other upstream 798058 12481920 ~ 12489156 (-) False cpm
TU41786 other upstream 798240 12482102 ~ 12489156 (-) False cpm
XR_006250598.1 other upstream 1633070 13316932 ~ 13361938 (-) False tmcc3
XR_006250597.1 other upstream 1633070 13316932 ~ 13361938 (-) False tmcc3

Expression Profile