Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU42027 |
| length | 248 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G28349 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 13227700 ~ 13227947 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU42001 | lncRNA | downstream | 49716 | 13176961 ~ 13177984 (-) | False | tmem110l |
| XR_006250594.1 | lncRNA | downstream | 156180 | 12988707 ~ 13071520 (-) | True | LOC122342546 |
| XR_006250593.1 | lncRNA | downstream | 156180 | 13022123 ~ 13071520 (-) | False | LOC122342546 |
| TU41980 | lncRNA | downstream | 156547 | 12988876 ~ 13071153 (-) | False | LOC122342546 |
| TU41701 | lncRNA | downstream | 958960 | 12265665 ~ 12268740 (-) | True | G28130 |
| TU42028 | lncRNA | upstream | 1147 | 13229094 ~ 13229319 (-) | True | G28350 |
| TU42033 | lncRNA | upstream | 14559 | 13242506 ~ 13245388 (-) | True | G28353 |
| TU42039 | lncRNA | upstream | 22704 | 13250651 ~ 13252034 (-) | True | G28359 |
| TU42040 | lncRNA | upstream | 22704 | 13250651 ~ 13252034 (-) | False | G28359 |
| TU42067 | lncRNA | upstream | 83926 | 13311873 ~ 13319748 (-) | True | G28377 |
| XM_043236651.1 | mRNA | downstream | 40810 | 13177020 ~ 13186890 (-) | True | tmem110l |
| XM_043236342.1 | mRNA | downstream | 63577 | 13152421 ~ 13164123 (-) | False | itih2 |
| XM_043236341.1 | mRNA | downstream | 63577 | 13154146 ~ 13164123 (-) | True | itih2 |
| XM_043236346.1 | mRNA | downstream | 76994 | 13146654 ~ 13150706 (-) | False | atp5f1c |
| XM_043237035.1 | mRNA | upstream | 40128 | 13268075 ~ 13275467 (-) | False | pfkfb3 |
| XM_043237034.1 | mRNA | upstream | 40128 | 13268075 ~ 13275381 (-) | False | pfkfb3 |
| XM_043237036.1 | mRNA | upstream | 40587 | 13268534 ~ 13275474 (-) | True | pfkfb3 |
| XM_043236447.1 | mRNA | upstream | 53236 | 13281183 ~ 13301329 (-) | False | rbm17 |
| XM_043236444.1 | mRNA | upstream | 53236 | 13281183 ~ 13301329 (-) | True | rbm17 |
| TU41785 | other | downstream | 738544 | 12481920 ~ 12489156 (-) | False | cpm |
| TU41786 | other | downstream | 738544 | 12482102 ~ 12489156 (-) | False | cpm |
| TU41650 | other | downstream | 1211933 | 12014631 ~ 12015767 (-) | True | G28093 |
| XR_006250735.1 | other | downstream | 1681888 | 11426497 ~ 11545812 (-) | False | ppfia2 |
| TU41528 | other | downstream | 1803617 | 11422069 ~ 11424083 (-) | False | ppfia2 |
| XR_006250598.1 | other | upstream | 88985 | 13316932 ~ 13361938 (-) | False | tmcc3 |
| XR_006250597.1 | other | upstream | 88985 | 13316932 ~ 13361938 (-) | False | tmcc3 |
| XR_006250596.1 | other | upstream | 96578 | 13324525 ~ 13361938 (-) | False | tmcc3 |
| TU42098 | other | upstream | 183677 | 13411624 ~ 13422539 (-) | False | G28397 |
| XR_006250767.1 | other | upstream | 464998 | 13692945 ~ 13698715 (-) | False | LOC122343399 |
