RNA id: TU42429



Basic Information


Item Value
RNA id TU42429
length 690
RNA type TUCP
GC content 0.49
exon number 4
gene id cerk
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 14155492 ~ 14176742 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGAAAACCGCTATGTAGCCAAACTGCTTAGGAGAAACGAGCAACGTTTTAGCGactgtagtatttttattaaagaaaaattaaagcGTCGGGGCGATATAGTATAAACTCGATTTGAATATGAAAGTGAGATAACTAGCGTGTATTTGTTGTTAAGAGCAGAAATGGAGAAGCAGTCGCGTCTGTTGTGTTCTGAGCTGTGCGTTCAGCGCAGACCGTATGAGGTTACGTTAAACTGCGCGATTCTCGCGTGGAAAGACAGACAAATCGCCAAAAAACACACCGGACGCGCCATATATGGAGCTGTCAAAGCGGGTAGTCACTGCGTCCCGGTGTGCGAGATTATAGCCGTTCAGGAAAAGGAAGATGACTCTCCTTGCAAAGACACTGGAAAATGGCAGAAGGTCCCTCAGAGCCCAGCAGACTCCTGCCAGCACGCTTTCACAGTGTACTATGTAGAGAGGACGAGGCAGCGCTGCTGGCGGTGCAGCAACGTGACTTTCCACTGCTCTGAACATTCCCTGTGTCTGCTCTGGGTCCAAACTATAAGGGAACAACTTGCACTGCTGACCAATCGACCGAAGAGCTTGCTAGTGTACATCAACCCCTACGGAGGAAAACAACGTGGGAAGCAGATTTACGACCACAAAGTGGCCCCCATCTTTTCCCGGGCTTCCATTTCCACCGACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42390 lncRNA downstream 94896 13994018 ~ 14074526 (-) True G28597
TU42391 lncRNA downstream 94896 14050599 ~ 14074526 (-) False G28597
XR_006250560.1 lncRNA downstream 99017 14068087 ~ 14070405 (-) True LOC122342415
TU42387 lncRNA downstream 176620 13992051 ~ 13992802 (-) True G28594
TU42368 lncRNA downstream 188258 13980790 ~ 13981164 (-) True G28577
TU42554 lncRNA upstream 634715 14811440 ~ 14825838 (-) True LOC122342647
XR_006250623.1 lncRNA upstream 647048 14823773 ~ 14825837 (-) False LOC122342647
TU42586 lncRNA upstream 826424 15003149 ~ 15003429 (-) True G28738
XR_006250554.1 lncRNA upstream 841060 15017785 ~ 15023863 (-) True LOC122342397
TU42674 lncRNA upstream 1032959 15209684 ~ 15213451 (-) True G28789
XM_043236606.1 mRNA downstream 183976 13982356 ~ 13985446 (-) True srr
XM_043236607.1 mRNA downstream 183989 13982356 ~ 13985433 (-) False srr
XM_043236601.1 mRNA downstream 188807 13975805 ~ 13980615 (-) False alg10
XM_043236600.1 mRNA downstream 188814 13977356 ~ 13980608 (-) True alg10
XM_043236599.1 mRNA downstream 193792 13970264 ~ 13975630 (-) True LOC122342633
XM_043237009.1 mRNA upstream 511148 14687873 ~ 14704622 (-) True LOC122342862
XM_043236609.1 mRNA upstream 528068 14704793 ~ 14725207 (-) True LOC122342640
XM_043236610.1 mRNA upstream 529555 14706280 ~ 14725207 (-) False LOC122342640
XM_043236612.1 mRNA upstream 631818 14808543 ~ 14810711 (-) True LOC122342642
XM_043236615.1 mRNA upstream 634283 14811008 ~ 14822661 (-) True LOC122342645
TU42363 other downstream 188863 13975357 ~ 13980559 (-) True G28575
XR_006250741.1 other downstream 337571 13815574 ~ 13831851 (-) True LOC122343280
XR_006250767.1 other downstream 470707 13692945 ~ 13698715 (-) False LOC122343399
XR_006250766.1 other downstream 470707 13693180 ~ 13698715 (-) False LOC122343399
TU42098 other downstream 746883 13411624 ~ 13422539 (-) False G28397
TU42539 other upstream 519135 14695860 ~ 14697186 (-) False LOC122342862
TU42549 other upstream 631872 14808597 ~ 14810137 (-) False LOC122342642
TU42583 other upstream 847862 15024587 ~ 15027618 (-) True LOC122342864
TU42581 other upstream 849385 15026110 ~ 15027618 (-) False LOC122342864
XR_006250613.1 other upstream 1424715 15601440 ~ 15611575 (-) False kiaa0930

Expression Profile