RNA id: XM_043237012.1


Basic Information

Item Value
RNA id XM_043237012.1
length 495
RNA type mRNA
GC content 0.48
exon number 6
gene id LOC122342864
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15024587 ~ 15027663 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCGAATGTATTGTTTCCGTTACGGGCAGATTTTGAACTTTCACCCCGGAGCTTGTCTTTCCTCTTCCGTTTACAGCGATAGCAGgtcaAGATGGTACAACGTCTGACTTACCGACGTAGGCTTTCCTACAACACTGCTTCAAACAAGACCAGACTGTCCCGTACGCCAGGTAACCGCATTGTGTACCTGTACACCAAGAAGACTGGAAAGGCACCCAAGTCAGCATGCGGCATCTGTCCCGGTAGACTGCGTGGTATCCGTGCTGTGAGACCCCAGGTTCTTATGAGACTCTCAAAAACCAAGAAGCATGTCAGCCGAGCTTATGGTGGTTCCATGTGTGCCAAGTGTGTACGAGACAGGGCAACACTAGATCAAGCGAGCTTTCTCATTGAGGAGCAGAAGATTGTGGTCAAAGTACTGAAGGCACAGGCACAAAGCCAGAAGTCTAAGTAGAAGGTGATTTTTACTGTTCAAATAAAAGAACCGGAAAGCAA

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250554.1 lncRNA downstream 1521 15017785 ~ 15023863 (-) True LOC122342397
TU42586 lncRNA downstream 21955 15003149 ~ 15003429 (-) True G28738
TU42554 lncRNA downstream 199546 14811440 ~ 14825838 (-) True LOC122342647
XR_006250623.1 lncRNA downstream 199547 14823773 ~ 14825837 (-) False LOC122342647
TU42390 lncRNA downstream 950858 13994018 ~ 14074526 (-) True G28597
TU42674 lncRNA upstream 182021 15209684 ~ 15213451 (-) True G28789
TU42788 lncRNA upstream 389193 15416856 ~ 15418238 (-) True G28850
XR_006250641.1 lncRNA upstream 416101 15443764 ~ 15445229 (-) True LOC122342747
TU42824 lncRNA upstream 537756 15565419 ~ 15655181 (-) True G28870
TU42849 lncRNA upstream 705700 15733363 ~ 15733883 (-) True G28887
XM_043236616.1 mRNA downstream 178207 14826267 ~ 14847177 (-) True LOC122342646
XM_043236615.1 mRNA downstream 202723 14811008 ~ 14822661 (-) True LOC122342645
XM_043236614.1 mRNA downstream 202723 14811008 ~ 14822661 (-) False LOC122342645
XM_043236612.1 mRNA downstream 214673 14808543 ~ 14810711 (-) True LOC122342642
XM_043236609.1 mRNA downstream 300177 14704793 ~ 14725207 (-) True LOC122342640
XM_043237810.1 mRNA upstream 96382 15124045 ~ 15136539 (-) False brd1a
XM_043237809.1 mRNA upstream 96382 15124045 ~ 15136539 (-) False brd1a
XM_043237808.1 mRNA upstream 96382 15124045 ~ 15136537 (-) False brd1a
XM_043237807.1 mRNA upstream 96382 15124045 ~ 15136536 (-) True brd1a
XM_043236578.1 mRNA upstream 116125 15143788 ~ 15148210 (-) True alg12
TU42549 other downstream 215247 14808597 ~ 14810137 (-) False LOC122342642
TU42539 other downstream 328198 14695860 ~ 14697186 (-) False LOC122342862
TU42429 other downstream 848659 14169422 ~ 14176725 (-) False cerk
TU42363 other downstream 1044825 13975357 ~ 13980559 (-) True G28575
XR_006250741.1 other downstream 1193533 13815574 ~ 13831851 (-) True LOC122343280
XR_006250613.1 other upstream 573777 15601440 ~ 15611575 (-) False kiaa0930
XR_006250809.1 other upstream 819306 15846969 ~ 15847087 (-) True LOC122343609
XR_006250818.1 other upstream 829721 15857384 ~ 15857502 (-) True LOC122343689
XR_006250819.1 other upstream 852458 15880121 ~ 15880239 (-) True LOC122343700
XR_006250820.1 other upstream 852857 15880520 ~ 15880638 (-) True LOC122343711

Expression Profile