RNA id: TU42860



Basic Information


Item Value
RNA id TU42860
length 371
RNA type TUCP
GC content 0.43
exon number 1
gene id G28898
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15932494 ~ 15932864 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTTATGGAAATATGGACTCCAACTTGAATATTGAGGACTGGATTGAGGAGGCTAAGGTGTGTATCGAGGGTAGGGGTTGGTCTGATAAGGAAAAGGGGGTGTTTCTGCTTGATCATCTGGGAGGGGAGGCCAGAATGGAGATAAAACTCCAATCTTCAGCTATCAGGGAAAATCCAGAAGCTGTTTTTGAAGTATTAAAAGATTTGTATGGGGGGAGACGGACATTTGTGCAATTACAACAGAGGTTTTATGAgcgaaaacaaaaagaaggcGAATCACTTACCGAATTTTCTCATGCTCTTATGTCATTGATGGATGCAATTCTTAACGGGAACCCAGGCAGCGTTCCGAATTCTGACAAAGTGCTTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 3594 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 88755 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 198611 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 277313 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 487265 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 445836 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 478996 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 478996 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 479663 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 527898 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 252376 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 252470 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 252470 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 259260 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 268188 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 544927 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 551703 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 605116 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 640263 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 777660 16710524 ~ 16724794 (-) False LOC122343211
XR_006250909.1 other downstream 11537 15920839 ~ 15920957 (-) True LOC122343929
XR_006250833.1 other downstream 13530 15918846 ~ 15918964 (-) True LOC122343844
XR_006250832.1 other downstream 15900 15916476 ~ 15916594 (-) True LOC122343837
XR_006250831.1 other downstream 16296 15916080 ~ 15916198 (-) True LOC122343825
XR_006250803.1 other downstream 17886 15914490 ~ 15914608 (-) True LOC122343552
XR_006250811.1 other upstream 5881 15938745 ~ 15938863 (-) True LOC122343620
XR_006250900.1 other upstream 6278 15939142 ~ 15939260 (-) True LOC122343919
XR_006250804.1 other upstream 13829 15946693 ~ 15946811 (-) True LOC122343564
XR_006250798.1 other upstream 17018 15949882 ~ 15950000 (-) True LOC122343536
XR_006250807.1 other upstream 18207 15951071 ~ 15951189 (-) True LOC122343586

Expression Profile