Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU43253 |
| length | 392 |
| lncRNA type | inter_gene |
| GC content | 0.61 |
| exon number | 1 |
| gene id | G29200 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 17385289 ~ 17385680 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005768 | endosome | cellular_component |
| GO:0005770 | late endosome | cellular_component |
| GO:0044433 | obsolete cytoplasmic vesicle part | cellular_component |
| GO:0044440 | obsolete endosomal part | cellular_component |
| GO:0031902 | late endosome membrane | cellular_component |
| GO:0097708 | intracellular vesicle | cellular_component |
| GO:0031410 | cytoplasmic vesicle | cellular_component |
| GO:0005681 | spliceosomal complex | cellular_component |
| GO:0010008 | endosome membrane | cellular_component |
| GO:0031982 | vesicle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU43244 | lncRNA | upstream | 90649 | 17294375 ~ 17294640 (+) | True | G29192 |
| TU43233 | lncRNA | upstream | 164673 | 17220257 ~ 17220616 (+) | True | G29181 |
| TU43230 | lncRNA | upstream | 165775 | 17219142 ~ 17219514 (+) | True | G29178 |
| XR_006250625.1 | lncRNA | upstream | 266183 | 17090539 ~ 17119106 (+) | True | LOC122342667 |
| XR_006250626.1 | lncRNA | upstream | 266183 | 17093963 ~ 17119106 (+) | False | LOC122342667 |
| TU43359 | lncRNA | downstream | 168153 | 17553833 ~ 17554190 (+) | True | G29272 |
| XR_006250563.1 | lncRNA | downstream | 281470 | 17667150 ~ 17669761 (+) | True | LOC122342426 |
| XR_006250674.1 | lncRNA | downstream | 324375 | 17710055 ~ 17711711 (+) | True | LOC122343158 |
| TU43407 | lncRNA | downstream | 352387 | 17738067 ~ 17739667 (+) | True | G29305 |
| TU43408 | lncRNA | downstream | 359848 | 17745528 ~ 17746317 (+) | True | G29306 |
| XM_043237097.1 | mRNA | upstream | 36419 | 17308293 ~ 17348870 (+) | False | jag2b |
| XM_043237095.1 | mRNA | upstream | 36419 | 17308294 ~ 17348870 (+) | True | jag2b |
| XM_043237096.1 | mRNA | upstream | 36419 | 17308294 ~ 17348870 (+) | False | jag2b |
| XM_043237833.1 | mRNA | upstream | 91653 | 17266457 ~ 17293636 (+) | True | nudt14 |
| XM_043236670.1 | mRNA | upstream | 208792 | 17122433 ~ 17176497 (+) | True | brf1b |
| XM_043237874.1 | mRNA | downstream | 11455 | 17397135 ~ 17410852 (+) | True | esr2a |
| XM_043237875.1 | mRNA | downstream | 11455 | 17397135 ~ 17410852 (+) | False | esr2a |
| XM_043236627.1 | mRNA | downstream | 97753 | 17483433 ~ 17490295 (+) | True | LOC122342653 |
| XM_043236626.1 | mRNA | downstream | 97753 | 17483433 ~ 17490295 (+) | False | LOC122342653 |
| XM_043236628.1 | mRNA | downstream | 99218 | 17484898 ~ 17490295 (+) | False | LOC122342653 |
| TU42966 | other | upstream | 910908 | 16473898 ~ 16474381 (+) | True | G28982 |
| TU42861 | other | upstream | 1399563 | 15985219 ~ 15985726 (+) | True | G28899 |
| TU42853 | other | upstream | 1543434 | 15841372 ~ 15841855 (+) | True | G28891 |
| TU42722 | other | upstream | 1730108 | 15650295 ~ 15655181 (+) | True | cdkn1d |
| TU42701 | other | upstream | 1829607 | 15439334 ~ 15555682 (+) | True | G28806 |
| TU43729 | other | downstream | 914735 | 18300415 ~ 18301189 (+) | True | G29526 |
| TU43756 | other | downstream | 1050780 | 18436460 ~ 18461317 (+) | True | G29545 |
| TU43926 | other | downstream | 1497499 | 18883179 ~ 18886402 (+) | True | G29642 |
| TU44195 | other | downstream | 1904540 | 19290220 ~ 19342911 (+) | True | G29814 |
| TU44225 | other | downstream | 2345582 | 19731262 ~ 19786128 (+) | False | G29835 |
