RNA id: TU43831


Basic Information

Item Value
RNA id TU43831
length 266
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G29591
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18600428 ~ 18603316 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCTCCGCCAGTGATGTATGGCACTTGGTCCCAGGTGGCCACAAAGGCTGATGTAGCCGTAAAAGGCACCCTTGGAAAATATTGGTTAACCGTTTGAGTGACTTGTGTCAGTACAGCACTGCTTGTGTCCTCTCTGTAGGAGATAGTTCCGCCGTTGACATTGAAAAGGTCTGTCCACAGAGGAGCAATGATGTCTAATCCAGCGTTCCGATAAGGAACGAAAGCTGACAGGGCTCGAGTAAAGGTCAGGTGACCATTGTTGTTCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250718.1 lncRNA upstream 6312 18591447 ~ 18594116 (+) True LOC122343196
TU43761 lncRNA upstream 134591 18441631 ~ 18465837 (+) True G29548
TU43755 lncRNA upstream 139833 18435643 ~ 18460595 (+) True G29544
TU43674 lncRNA upstream 539512 18059335 ~ 18060916 (+) True G29484
TU43659 lncRNA upstream 597949 17999597 ~ 18002479 (+) True G29476
TU43851 lncRNA downstream 59544 18662860 ~ 18665083 (+) True G29600
TU43888 lncRNA downstream 181729 18785045 ~ 18785246 (+) True G29627
TU43902 lncRNA downstream 211567 18814883 ~ 18815278 (+) True G29633
XR_006250682.1 lncRNA downstream 299919 18903235 ~ 18907824 (+) True LOC122343164
TU44148 lncRNA downstream 329003 18932319 ~ 18932690 (+) True G29777
XM_043237231.1 mRNA upstream 35062 18556569 ~ 18565366 (+) True trim24
XM_043237233.1 mRNA upstream 35062 18556569 ~ 18565366 (+) False trim24
XM_043237232.1 mRNA upstream 35062 18556571 ~ 18565366 (+) False trim24
XM_043237471.1 mRNA upstream 46039 18547531 ~ 18554389 (+) True rab21
XM_043237484.1 mRNA upstream 379171 18218716 ~ 18221257 (+) False LOC122343129
XM_043237271.1 mRNA downstream 16235 18619551 ~ 18622911 (+) False LOC122343002
XM_043237268.1 mRNA downstream 16626 18619942 ~ 18627271 (+) False LOC122343002
XM_043237267.1 mRNA downstream 18948 18622264 ~ 18627271 (+) True LOC122343002
XM_043237270.1 mRNA downstream 19705 18623021 ~ 18627271 (+) False LOC122343002
XM_043237265.1 mRNA downstream 24109 18627425 ~ 18632437 (+) True LOC122343000
TU43756 other upstream 139111 18436460 ~ 18461317 (+) True G29545
TU43729 other upstream 299239 18300415 ~ 18301189 (+) True G29526
TU42966 other upstream 2126047 16473898 ~ 16474381 (+) True G28982
TU42861 other upstream 2614702 15985219 ~ 15985726 (+) True G28899
TU42853 other upstream 2758573 15841372 ~ 15841855 (+) True G28891
TU43926 other downstream 279863 18883179 ~ 18886402 (+) True G29642
TU44195 other downstream 686904 19290220 ~ 19342911 (+) True G29814
TU44225 other downstream 1127946 19731262 ~ 19786128 (+) False G29835
TU44230 other downstream 1142425 19745741 ~ 19747442 (+) False LOC122343071
TU44267 other downstream 1434622 20037938 ~ 20040195 (+) False LOC122343063

Expression Profile