RNA id: TU44114



Basic Information


Item Value
RNA id TU44114
length 248
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G29753
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18857474 ~ 18857721 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cttgtatgtatgcatgtaggTGTGATTATTtagctgcagctttgtttttattcctgtctttgtgtttttcttttaattaatttgacttggttgcttttattttactaatgtagctaattgttttgacagtgcatcactaatattgtacacaatgctatttaaaaaatggcattgttttaatgttgcttgcatgtatgcatgttatgagttggtgtttttgaaaattattttgcagtattaaaGTTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44101 lncRNA downstream 50806 18800904 ~ 18806668 (-) True G29741
TU44098 lncRNA downstream 70782 18786196 ~ 18786692 (-) True G29738
TU44096 lncRNA downstream 73559 18783605 ~ 18783915 (-) True G29736
TU44083 lncRNA downstream 110166 18744601 ~ 18747308 (-) True G29726
XR_006250719.1 lncRNA downstream 116693 18737815 ~ 18740781 (-) True LOC122343197
XR_006250724.1 lncRNA upstream 166 18857887 ~ 18861170 (-) True LOC122343202
XR_006250707.1 lncRNA upstream 98497 18956218 ~ 18958048 (-) True LOC122343185
TU44168 lncRNA upstream 109055 18966776 ~ 18967064 (-) True G29796
TU44183 lncRNA upstream 188096 19045817 ~ 19053531 (-) True G29806
XR_006250721.1 lncRNA upstream 368253 19225974 ~ 19226499 (-) True LOC122343199
XM_043237215.1 mRNA downstream 4848 18843947 ~ 18852626 (-) True LOC122342975
XM_043237235.1 mRNA downstream 16758 18836618 ~ 18840716 (-) True LOC122342979
XM_043237165.1 mRNA downstream 121876 18693002 ~ 18735598 (-) False LOC122342944
XM_043237162.1 mRNA downstream 121877 18693002 ~ 18735597 (-) False LOC122342944
XM_043237164.1 mRNA downstream 121877 18693002 ~ 18735597 (-) False LOC122342944
XM_043237400.1 mRNA upstream 41086 18898807 ~ 18902552 (-) False LOC122343082
XM_043237399.1 mRNA upstream 41086 18898807 ~ 18902498 (-) True LOC122343082
XM_043237486.1 mRNA upstream 58605 18916326 ~ 18917533 (-) False LOC122343130
XM_043237328.1 mRNA upstream 65542 18923263 ~ 18927380 (-) True LOC122343034
XM_043236047.1 mRNA upstream 109540 18967261 ~ 18970537 (-) True LOC122342237
TU44045 other downstream 121834 18724825 ~ 18735640 (-) False LOC122342944
XR_006250671.1 other downstream 195821 18656980 ~ 18661653 (-) True LOC122343054
XR_006250670.1 other downstream 195825 18656980 ~ 18661649 (-) False LOC122343054
TU43941 other downstream 429131 18408560 ~ 18428343 (-) True G29653
TU43653 other downstream 877552 17970605 ~ 17979922 (-) True G29473
TU44133 other upstream 42844 18900565 ~ 18902548 (-) False LOC122343082
XR_006250672.1 other upstream 58605 18916326 ~ 18917533 (-) True LOC122343130
TU44159 other upstream 73815 18931536 ~ 18931875 (-) True G29787
unassigned_transcript_306 other upstream 1202868 20060589 ~ 20060671 (-) True trnal-aag
unassigned_transcript_307 other upstream 1203631 20061352 ~ 20061432 (-) True trnal-cag

Expression Profile