Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU44325 |
| length | 1283 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 3 |
| gene id | G29896 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 20045114 ~ 20196427 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0070013 | intracellular organelle lumen | cellular_component |
| GO:0044451 | obsolete nucleoplasm part | cellular_component |
| GO:0016592 | mediator complex | cellular_component |
| GO:0005654 | nucleoplasm | cellular_component |
| GO:0031974 | membrane-enclosed lumen | cellular_component |
| GO:0031981 | nuclear lumen | cellular_component |
| GO:0043233 | organelle lumen | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU44310 | lncRNA | downstream | 35402 | 20000988 ~ 20009712 (-) | True | LOC122343146 |
| TU44247 | lncRNA | downstream | 64391 | 19980489 ~ 19980723 (-) | True | G29853 |
| TU44245 | lncRNA | downstream | 64755 | 19979957 ~ 19980359 (-) | True | G29851 |
| TU44240 | lncRNA | downstream | 68973 | 19975231 ~ 19976141 (-) | True | G29847 |
| TU44243 | lncRNA | downstream | 71667 | 19944294 ~ 19973447 (-) | True | G29849 |
| TU44337 | lncRNA | upstream | 74679 | 20271106 ~ 20272289 (-) | True | G29905 |
| TU44345 | lncRNA | upstream | 106686 | 20303113 ~ 20311182 (-) | True | LOC122343168 |
| XR_006250688.1 | lncRNA | upstream | 106780 | 20303207 ~ 20311190 (-) | False | LOC122343168 |
| TU44344 | lncRNA | upstream | 113492 | 20309919 ~ 20311182 (-) | False | LOC122343168 |
| TU44789 | lncRNA | upstream | 125147 | 20321574 ~ 20440841 (-) | True | G30238 |
| XM_043237503.1 | mRNA | downstream | 41561 | 20001093 ~ 20003553 (-) | False | LOC122343146 |
| XM_043237466.1 | mRNA | downstream | 50518 | 19990684 ~ 19994596 (-) | True | LOC122343115 |
| XM_043237364.1 | mRNA | downstream | 55026 | 19981179 ~ 19990088 (-) | False | LOC122343058 |
| XM_043237363.1 | mRNA | downstream | 55107 | 19981179 ~ 19990007 (-) | False | LOC122343058 |
| XM_043237365.1 | mRNA | downstream | 55107 | 19981179 ~ 19990007 (-) | True | LOC122343058 |
| XM_043236066.1 | mRNA | upstream | 45188 | 20241615 ~ 20251885 (-) | True | LOC122342268 |
| XM_043237375.1 | mRNA | upstream | 67233 | 20263660 ~ 20266849 (-) | False | LOC122343064 |
| XM_043237374.1 | mRNA | upstream | 67233 | 20263660 ~ 20266849 (-) | True | LOC122343064 |
| XM_043237276.1 | mRNA | upstream | 70534 | 20266961 ~ 20269906 (-) | True | LOC122343007 |
| XM_043237449.1 | mRNA | upstream | 134020 | 20330447 ~ 20333281 (-) | True | LOC122343112 |
| TU44159 | other | downstream | 1113239 | 18931536 ~ 18931875 (-) | True | G29787 |
| XR_006250672.1 | other | downstream | 1127581 | 18916326 ~ 18917533 (-) | True | LOC122343130 |
| TU44133 | other | downstream | 1142566 | 18900565 ~ 18902548 (-) | False | LOC122343082 |
| TU44045 | other | downstream | 1309474 | 18724825 ~ 18735640 (-) | False | LOC122342944 |
| XR_006250670.1 | other | downstream | 1383465 | 18656980 ~ 18661649 (-) | False | LOC122343054 |
| unassigned_transcript_381 | other | upstream | 14129 | 20210556 ~ 20210638 (-) | True | trnal-aag_25 |
| unassigned_transcript_382 | other | upstream | 16035 | 20212462 ~ 20212543 (-) | True | trnal-aag_26 |
| unassigned_transcript_383 | other | upstream | 16814 | 20213241 ~ 20213322 (-) | True | trnal-cag_25 |
| unassigned_transcript_384 | other | upstream | 17822 | 20214249 ~ 20214332 (-) | True | trnal-aag_27 |
| unassigned_transcript_385 | other | upstream | 19733 | 20216160 ~ 20216239 (-) | True | trnal-aag_28 |
