RNA id: TU44630


Basic Information

Item Value
RNA id TU44630
length 610
RNA type TUCP
GC content 0.56
exon number 3
gene id G30115
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21639540 ~ 21641756 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCCGCGCTCCCGCGATTGATTCGGATGAAGACAGAACAAACTCCTGCGGAAGAGGCCGAGGTCCACGGGACGCCGCTATAAAGATGGCTTTGGtgaaagaggagagtgaagacgTAAAGATCGAAGAAACACTGAGAGTCAAGCGTGAAGATGGCGAAgaacaaacagACCCGATGGTGCTGAAAGAGGAGAGCCAAGAACGAAACGAGTATCGCCGCGATTTCAAAACGGAAGAGGAATCGATCGGTTGCCGCCGAGTCGAAAAGACCCCCTTGGCAAAAACGGCGCAAGCCGCAGGCGTTGATTCTCGGCCGAGCGCTCGTCCCGGAGAGGCCCCTTTCACCTGCCAGCAGTGCGGAGAGATCTTACCCCACAAAAGAAGCTTTAAAGTCCACGTGAAAATCCACGCCGAAAAGCAGCCGTTGCTGTGccctcagtgcgggaagagtttcacgCGGAAATACAACCTCAACTCCCACATGAGGACGCACACCGGCGAGAGGCCCTACCCCTGTAcgcagtgcgggaagagcttttCGCAGACGAGCCAGCTCAACGTccacatgaggatccacacgggagagaagcctttcaGCTGCGAGCTCTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU44664 lncRNA upstream 112529 21485712 ~ 21527011 (+) True G30133
TU44661 lncRNA upstream 117287 21479557 ~ 21522253 (+) True G30132
TU44668 lncRNA upstream 140026 21498864 ~ 21499514 (+) True G30136
TU44666 lncRNA upstream 141159 21496823 ~ 21498381 (+) True G30134
TU44624 lncRNA upstream 265003 21369422 ~ 21374537 (+) True G30110
TU44657 lncRNA downstream 107254 21749010 ~ 21811284 (+) True G30130
TU44748 lncRNA downstream 499588 22141344 ~ 22255433 (+) True G30205
TU44753 lncRNA downstream 520882 22162638 ~ 22240294 (+) True G30206
TU44760 lncRNA downstream 533199 22174955 ~ 22252519 (+) True G30212
TU44775 lncRNA downstream 608679 22250435 ~ 22251792 (+) True G30226
XM_043237315.1 mRNA upstream 186678 21449517 ~ 21452862 (+) True LOC122343031
XM_043236091.1 mRNA upstream 190030 21447240 ~ 21449510 (+) True LOC122342295
XM_043236090.1 mRNA upstream 239392 21398817 ~ 21400148 (+) True LOC122342293
XM_043237468.1 mRNA upstream 259901 21377538 ~ 21379639 (+) True LOC122343117
XM_043236086.1 mRNA upstream 333904 21292312 ~ 21305636 (+) True LOC122342289
XM_043237301.1 mRNA downstream 2563 21644319 ~ 21650178 (+) False LOC122343024
XM_043237300.1 mRNA downstream 2789 21644545 ~ 21650178 (+) True LOC122343024
XM_043237208.1 mRNA downstream 31964 21673720 ~ 21690532 (+) True LOC122342967
XM_043237293.1 mRNA downstream 32046 21673802 ~ 21809079 (+) True LOC122343020
XM_043237294.1 mRNA downstream 32046 21673802 ~ 21809079 (+) False LOC122343020
TU44637 other upstream 9420 21388193 ~ 21630120 (+) True G30119
TU44553 other upstream 468945 21169249 ~ 21170595 (+) False LOC122342286
TU44534 other upstream 496709 21118562 ~ 21142831 (+) True G30058
TU44410 other upstream 932694 20696672 ~ 20706846 (+) True G29961
TU44357 other upstream 1270724 20367675 ~ 20368816 (+) True G29921
TU44767 other downstream 589714 22231470 ~ 22231924 (+) True G30218
TU44785 other downstream 655141 22296897 ~ 22301519 (+) False LOC122342310
XR_006250667.1 other downstream 1020070 22661826 ~ 22682712 (+) False LOC122343019
TU45293 other downstream 1136286 22778042 ~ 22779597 (+) False LOC122342317
TU45355 other downstream 1487350 23129106 ~ 23130189 (+) True G30636

Expression Profile