RNA id: TU44668


Basic Information

Item Value
RNA id TU44668
length 212
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G30136
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21498864 ~ 21499514 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ccggagagaaaccttttgcctgccaacagtgtgggaAGACTTTTGCTCAAAAAGGAAACCTTAAAAAACACATGACCATTCACTTCGACATAATGGCATTGAAAGAGGAGAAAGAAGTACTCAAGATCGAAGAGGAAGATCTTAAAGTCCACATGAGGATTCAAACCAGAAAAAAACCcttcacctgccaacagtgtggaaaaggTTTCACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU44666 lncRNA upstream 483 21496823 ~ 21498381 (+) True G30134
TU44624 lncRNA upstream 124327 21369422 ~ 21374537 (+) True G30110
TU44580 lncRNA upstream 161840 21311555 ~ 21337024 (+) True G30085
TU44588 lncRNA upstream 197857 21276110 ~ 21301007 (+) True G30090
TU44570 lncRNA upstream 250439 21248187 ~ 21248425 (+) True G30077
TU44657 lncRNA downstream 249496 21749010 ~ 21811284 (+) True G30130
TU44748 lncRNA downstream 641830 22141344 ~ 22255433 (+) True G30205
TU44753 lncRNA downstream 663124 22162638 ~ 22240294 (+) True G30206
TU44760 lncRNA downstream 675441 22174955 ~ 22252519 (+) True G30212
TU44775 lncRNA downstream 750921 22250435 ~ 22251792 (+) True G30226
XM_043237315.1 mRNA upstream 46002 21449517 ~ 21452862 (+) True LOC122343031
XM_043236091.1 mRNA upstream 49354 21447240 ~ 21449510 (+) True LOC122342295
XM_043236090.1 mRNA upstream 98716 21398817 ~ 21400148 (+) True LOC122342293
XM_043237468.1 mRNA upstream 119225 21377538 ~ 21379639 (+) True LOC122343117
XM_043236086.1 mRNA upstream 193228 21292312 ~ 21305636 (+) True LOC122342289
XM_043237301.1 mRNA downstream 144805 21644319 ~ 21650178 (+) False LOC122343024
XM_043237300.1 mRNA downstream 145031 21644545 ~ 21650178 (+) True LOC122343024
XM_043237208.1 mRNA downstream 174206 21673720 ~ 21690532 (+) True LOC122342967
XM_043237293.1 mRNA downstream 174288 21673802 ~ 21809079 (+) True LOC122343020
XM_043237294.1 mRNA downstream 174288 21673802 ~ 21809079 (+) False LOC122343020
TU44553 other upstream 328269 21169249 ~ 21170595 (+) False LOC122342286
TU44534 other upstream 356033 21118562 ~ 21142831 (+) True G30058
TU44410 other upstream 792018 20696672 ~ 20706846 (+) True G29961
TU44357 other upstream 1130048 20367675 ~ 20368816 (+) True G29921
XR_006250910.1 other upstream 1250635 20248111 ~ 20248229 (+) True LOC122343930
TU44630 other downstream 140026 21639540 ~ 21641756 (+) True G30115
TU44767 other downstream 731956 22231470 ~ 22231924 (+) True G30218
TU44785 other downstream 797383 22296897 ~ 22301519 (+) False LOC122342310
XR_006250667.1 other downstream 1162312 22661826 ~ 22682712 (+) False LOC122343019
TU45293 other downstream 1278528 22778042 ~ 22779597 (+) False LOC122342317

Expression Profile