RNA id: TU44782



Basic Information


Item Value
RNA id TU44782
length 268
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G30233
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22273811 ~ 22280970 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AACGAAACTCAAATTAAGTAGGTCGCACTGAACACTTGCAGGAAGCCGATCACTGAATGGGAGCCGGTCAACGCTCGCCAAACGCGCACAGTGATGAACCGACCATCTCCGTTTCCATAGCCTTAGGTTTCAGCATTAAACAAGGAACAGAGGAAatagcagcaaaacagcagcaCAGTCTTAATCTGTTGGCTGCAATCGAAGCGTCTCCACGGAATATCCTGCTAAGATTTAACAATTCGTTAACCAAATTAACAAatgtaataca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44748 lncRNA upstream 18378 22141344 ~ 22255433 (+) True G30205
TU44760 lncRNA upstream 21292 22174955 ~ 22252519 (+) True G30212
TU44775 lncRNA upstream 22019 22250435 ~ 22251792 (+) True G30226
TU44753 lncRNA upstream 33517 22162638 ~ 22240294 (+) True G30206
TU44657 lncRNA upstream 462527 21749010 ~ 21811284 (+) True G30130
XR_006250710.1 lncRNA downstream 25825 22306795 ~ 22311420 (+) True LOC122343188
TU45148 lncRNA downstream 59192 22340162 ~ 22344814 (+) True G30480
XR_006250708.1 lncRNA downstream 136957 22417927 ~ 22419692 (+) True LOC122343186
TU45205 lncRNA downstream 224285 22505255 ~ 22506192 (+) True G30526
TU45207 lncRNA downstream 251445 22532415 ~ 22533032 (+) True G30528
XM_043237344.1 mRNA upstream 166354 22105236 ~ 22107457 (+) True LOC122343041
XM_043237385.1 mRNA upstream 168879 22103318 ~ 22104932 (+) True LOC122343067
XM_043236100.1 mRNA upstream 431581 21841181 ~ 21842230 (+) True LOC122342305
XM_043237329.1 mRNA upstream 459374 21809156 ~ 21814437 (+) True LOC122343035
XM_043236096.1 mRNA upstream 512630 21743635 ~ 21761181 (+) True LOC122342301
XM_043236103.1 mRNA downstream 15927 22296897 ~ 22305148 (+) True LOC122342310
XM_043236104.1 mRNA downstream 123083 22404053 ~ 22405822 (+) True LOC122342312
XM_043237291.1 mRNA downstream 153084 22434054 ~ 22446278 (+) False LOC122343018
XM_043237290.1 mRNA downstream 153089 22434059 ~ 22446278 (+) True LOC122343018
XM_043237494.1 mRNA downstream 267647 22548617 ~ 22561763 (+) True LOC122343138
TU44767 other upstream 41887 22231470 ~ 22231924 (+) True G30218
TU44625 other upstream 512633 21368643 ~ 21761178 (+) False LOC122342301
TU44630 other upstream 632055 21639540 ~ 21641756 (+) True G30115
TU44637 other upstream 643691 21388193 ~ 21630120 (+) True G30119
TU44553 other upstream 1103216 21169249 ~ 21170595 (+) False LOC122342286
TU44785 other downstream 15927 22296897 ~ 22301519 (+) False LOC122342310
XR_006250667.1 other downstream 380856 22661826 ~ 22682712 (+) False LOC122343019
TU45293 other downstream 497072 22778042 ~ 22779597 (+) False LOC122342317
TU45355 other downstream 848136 23129106 ~ 23130189 (+) True G30636
TU45351 other downstream 876589 23157559 ~ 23159756 (+) True G30632

Expression Profile