RNA id: TU45009



Basic Information


Item Value
RNA id TU45009
length 348
RNA type TUCP
GC content 0.44
exon number 2
gene id G30395
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21383469 ~ 21386437 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGGACAGAGCTACTGAGATCCATGTGACACCGTTATAAAGATGGAGTTTCTGAAAGTGGAGCTTGAAGACGCGTTCACGGTCGAACCAGAAGATACTGAGACCCAGCTGAAGATGGTGTTCATTAAAGAGGAGAGTACAGACGTGAAGATCGAAGAAGCGTTCATCAAGCAGGAGGAAGCCGAGGAACAAATCAAGACCGCGTTCATCAAAGAGGAGCGTGAAGAAACTTTCAGAGTCAAACTTGAAGATGCTGAAGAACCAACAGACTCAACAGTGCTGAAAGAGGAGCAGGAAGAAACTGAAGAGAAATATCAGTATGAGAAACCTCATGATTTCCTAGAAAAATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44981 lncRNA downstream 104426 21276222 ~ 21279043 (-) True LOC122343113
TU44930 lncRNA downstream 257398 21117815 ~ 21126071 (-) True G30343
TU44875 lncRNA downstream 315281 21065914 ~ 21068188 (-) True G30301
TU44912 lncRNA downstream 329815 21052978 ~ 21053654 (-) False LOC122343098
TU44899 lncRNA downstream 409404 20972276 ~ 20974065 (-) True G30317
TU45015 lncRNA upstream 9394 21395372 ~ 21783591 (-) False LOC122343153
TU45027 lncRNA upstream 106286 21492264 ~ 21492907 (-) True G30406
TU45029 lncRNA upstream 113660 21499638 ~ 21499998 (-) True G30408
XR_006250701.1 lncRNA upstream 282832 21668810 ~ 21673424 (-) False LOC122343179
XR_006250700.1 lncRNA upstream 282832 21668810 ~ 21673424 (-) True LOC122343179
XM_043236089.1 mRNA downstream 278 21381792 ~ 21383191 (-) True LOC122342292
XM_043237491.1 mRNA downstream 46588 21327615 ~ 21336881 (-) False LOC122343135
XM_043237421.1 mRNA downstream 61374 21318814 ~ 21322095 (-) False LOC122343094
XM_043237420.1 mRNA downstream 61391 21318814 ~ 21322078 (-) True LOC122343094
XM_043236087.1 mRNA downstream 69499 21309532 ~ 21313970 (-) True LOC122342290
XM_043237508.1 mRNA upstream 1875 21387853 ~ 21396905 (-) True LOC122343153
XM_043237304.1 mRNA upstream 98803 21484781 ~ 21487205 (-) True LOC122343027
XM_043236092.1 mRNA upstream 101227 21487205 ~ 21495229 (-) True LOC122342296
XM_043237212.1 mRNA upstream 131495 21517473 ~ 21528946 (-) True LOC122342973
XM_043237341.1 mRNA upstream 151344 21537322 ~ 21542289 (-) True LOC122343039
TU44972 other downstream 53376 21327716 ~ 21330093 (-) True LOC122343135
TU44338 other downstream 1101069 20281106 ~ 20282400 (-) True G29906
TU44333 other downstream 1144915 20237137 ~ 20238554 (-) True G29902
unassigned_transcript_385 other downstream 1167230 20216160 ~ 20216239 (-) True trnal-aag_28
unassigned_transcript_384 other downstream 1169137 20214249 ~ 20214332 (-) True trnal-aag_27
TU45011 other upstream 243639 21629617 ~ 21776806 (-) True G30396
TU44977 other upstream 351113 21737091 ~ 21740330 (-) True G30372
TU45110 other upstream 742476 22128454 ~ 22245160 (-) True G30450
TU45123 other upstream 830057 22216035 ~ 22216470 (-) True G30457
TU45768 other upstream 2049002 23434980 ~ 23437015 (-) False LOC122342328

Expression Profile