RNA id: TU45011



Basic Information


Item Value
RNA id TU45011
length 564
RNA type TUCP
GC content 0.57
exon number 2
gene id G30396
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21629617 ~ 21776806 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GATCGAAGAAACACTGAGAGTCAAGCGTGAAGATGGCGAAgaacaaacagACCCGATGGTGCTGAAAGAGGAGAGCCAAGAACGAAACGAGTATCGCCGCGATTTCAAAACGGAAGAGGAATCGATCGGTTGCCGCCGAGTCGAAAAGACCCCCTTGGCAAAAACGGCGCAAGCCGCAGGCGTTGATTCTCGGCCGAGCGCTCGTCCCGGAGAGGCCCCTTTCACCTGCCAGCAGTGCGGAGAGATCTTACCCCACAAAAGAAGCTTTAAAGTCCACGTGAAAATCCACGCCGAAAAGCAGCCGTTGCTGTGccctcagtgcgggaagagtttcacgCGGAAATACAACCTCAACTCCCACATGAGGACGCACACCGGCGAGAGGCCCTACCCCTGTAcgcagtgcgggaagagcttttCGCAGACGAGCCAGCTCAACGTccacatgaggatccacacgggagagaagcctttcaGCTGCGAGCTCTGCGGCAAGAGCTTCAGGCAAAGCGCCGAGCTCAAAGCCCACGCCACGAcgcacaccggagagaagccttacgcGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45029 lncRNA downstream 129619 21499638 ~ 21499998 (-) True G30408
TU45027 lncRNA downstream 136710 21492264 ~ 21492907 (-) True G30406
TU44981 lncRNA downstream 350574 21276222 ~ 21279043 (-) True LOC122343113
TU44930 lncRNA downstream 503546 21117815 ~ 21126071 (-) True G30343
TU44875 lncRNA downstream 561429 21065914 ~ 21068188 (-) True G30301
TU45132 lncRNA upstream 503866 22280672 ~ 22281189 (-) True G30465
TU45173 lncRNA upstream 582411 22359217 ~ 22421953 (-) True G30499
XR_006250717.1 lncRNA upstream 619712 22396518 ~ 22398023 (-) True LOC122343195
TU45181 lncRNA upstream 648786 22425592 ~ 22428757 (-) True G30506
TU45193 lncRNA upstream 709969 22486775 ~ 22487119 (-) True G30518
XM_043237341.1 mRNA downstream 87328 21537322 ~ 21542289 (-) True LOC122343039
XM_043237212.1 mRNA downstream 100671 21517473 ~ 21528946 (-) True LOC122342973
XM_043236092.1 mRNA downstream 134388 21487205 ~ 21495229 (-) True LOC122342296
XM_043237175.1 mRNA downstream 136716 20568381 ~ 21492901 (-) True LOC122342952
XM_043237304.1 mRNA downstream 142412 21484781 ~ 21487205 (-) True LOC122343027
XM_043236101.1 mRNA upstream 70314 21847120 ~ 21860284 (-) True LOC122342306
XM_043237440.1 mRNA upstream 93609 21870415 ~ 21878772 (-) False LOC122343106
XM_043237439.1 mRNA upstream 93610 21870416 ~ 21878792 (-) True LOC122343106
XM_043237393.1 mRNA upstream 458951 22235757 ~ 22239007 (-) True LOC122343076
XM_043237479.1 mRNA upstream 539102 22315908 ~ 22320097 (-) True LOC122343126
TU45006 other downstream 243180 21383469 ~ 21386437 (-) True G30395
TU45009 other downstream 243639 21383469 ~ 21385978 (-) False G30395
TU44972 other downstream 299524 21327716 ~ 21330093 (-) True LOC122343135
TU44338 other downstream 1347217 20281106 ~ 20282400 (-) True G29906
TU44333 other downstream 1391063 20237137 ~ 20238554 (-) True G29902
TU45110 other upstream 351648 22128454 ~ 22245160 (-) True G30450
TU45123 other upstream 439229 22216035 ~ 22216470 (-) True G30457
TU45768 other upstream 1658174 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 1720323 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 1968680 23745486 ~ 23771768 (-) True G31050

Expression Profile