RNA id: TU45123


Basic Information

Item Value
RNA id TU45123
length 325
RNA type TUCP
GC content 0.44
exon number 3
gene id G30457
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22216035 ~ 22216470 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGCGGAGGGGGGTTTAAGTTCACAGATGCTCACAGGAAGAGACGCTCAAACAATCAGGATTCTCTCCTCGCCGCTCCTCACATTATGTGAACCTCTATACGTTCTGTTAGCTTCTAATTTGCTGAGAGTGGGTTCCTCAGAGAACGTGTTTGTGGAGGCTCAGGATTACTCTGGAGATCCCTTTCAAGTGAAGATCACAGTAATGAACCACCCGAAAAAGAACACAGAAATACTGTCGAAATCAGTGACACTGACTAAGGACAACAATTTCCAGAACCTTACAGATATAAAGGTGATGCCACTTTTCACACTTTTACTTAATgcg

Function

GO:

id name namespace
GO:0061008 hepaticobiliary system development biological_process
GO:0001889 liver development biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45059 lncRNA downstream 406417 21676876 ~ 21809618 (-) True G30423
TU45070 lncRNA downstream 443835 21769579 ~ 21772200 (-) False LOC122342302
TU45062 lncRNA downstream 539904 21673723 ~ 21676131 (-) True G30425
XR_006250701.1 lncRNA downstream 542611 21668810 ~ 21673424 (-) False LOC122343179
XR_006250700.1 lncRNA downstream 542611 21668810 ~ 21673424 (-) True LOC122343179
TU45132 lncRNA upstream 64202 22280672 ~ 22281189 (-) True G30465
TU45173 lncRNA upstream 142747 22359217 ~ 22421953 (-) True G30499
XR_006250717.1 lncRNA upstream 180048 22396518 ~ 22398023 (-) True LOC122343195
TU45181 lncRNA upstream 209122 22425592 ~ 22428757 (-) True G30506
TU45193 lncRNA upstream 270305 22486775 ~ 22487119 (-) True G30518
XM_043237439.1 mRNA downstream 337243 21870416 ~ 21878792 (-) True LOC122343106
XM_043237440.1 mRNA downstream 337263 21870415 ~ 21878772 (-) False LOC122343106
XM_043236101.1 mRNA downstream 355751 21847120 ~ 21860284 (-) True LOC122342306
XM_043236099.1 mRNA downstream 435416 21775098 ~ 21780619 (-) True LOC122342303
XM_043236098.1 mRNA downstream 443636 21769124 ~ 21772399 (-) True LOC122342302
XM_043237393.1 mRNA upstream 19287 22235757 ~ 22239007 (-) True LOC122343076
XM_043237479.1 mRNA upstream 99438 22315908 ~ 22320097 (-) True LOC122343126
XM_043237170.1 mRNA upstream 109040 22325510 ~ 22334793 (-) True LOC122342947
XM_043237171.1 mRNA upstream 169393 22385863 ~ 22395600 (-) True LOC122342948
XM_043237275.1 mRNA upstream 212604 22429074 ~ 22431623 (-) True LOC122343006
TU45011 other downstream 439229 21629617 ~ 21776806 (-) True G30396
TU44977 other downstream 475705 21737091 ~ 21740330 (-) True G30372
TU45006 other downstream 829598 21383469 ~ 21386437 (-) True G30395
TU45009 other downstream 830057 21383469 ~ 21385978 (-) False G30395
TU44972 other downstream 885942 21327716 ~ 21330093 (-) True LOC122343135
TU45768 other upstream 1218510 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 1280659 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 1529016 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 1893754 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 2087626 24304096 ~ 24497596 (-) True G31134

Expression Profile