RNA id: TU45132



Basic Information


Item Value
RNA id TU45132
length 385
lncRNA type inter_gene
GC content 0.46
exon number 3
gene id G30465
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22280672 ~ 22281189 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTTGCGGTTTTGCAGTGGTGCGCAGGCTGTCATTGATCCCCGGctgggtTGAGTCCACTTTCCGTGTGAATTGTCAAACATTATGCTGTGAGCAATCATACAACTTAGGTTATTTTGACGAAGATTTGGCAGGATATTCCGTGGAGACGCTTCGATTGCAGCCAACAGATTAAGACTGtgctgctgttttgctgctatTTCCTCTGTTCCTTGTTTAATGCTGAAACCTAAGGCTATGGAAACGGAGATGGTCGGTTCATCACTGTGCGCGTTTGGCGAGCGTTGACCGGCTCCCATTCAGTGATCGGCTTCCTGCAAGTGTTCAGTGCGACCTACTTAATTTGAGTTTCGTTGTTTTgttactgcatgtttttttttcttgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45059 lncRNA downstream 471054 21676876 ~ 21809618 (-) True G30423
TU45015 lncRNA downstream 497081 21395372 ~ 21783591 (-) False LOC122343153
TU45070 lncRNA downstream 508472 21769579 ~ 21772200 (-) False LOC122342302
TU45004 lncRNA downstream 514847 21378582 ~ 21765825 (-) True G30394
TU45062 lncRNA downstream 604541 21673723 ~ 21676131 (-) True G30425
TU45173 lncRNA upstream 78028 22359217 ~ 22421953 (-) True G30499
XR_006250717.1 lncRNA upstream 115329 22396518 ~ 22398023 (-) True LOC122343195
TU45181 lncRNA upstream 144403 22425592 ~ 22428757 (-) True G30506
TU45193 lncRNA upstream 205586 22486775 ~ 22487119 (-) True G30518
TU45195 lncRNA upstream 206231 22487420 ~ 22488169 (-) True G30520
XM_043237393.1 mRNA downstream 41665 22235757 ~ 22239007 (-) True LOC122343076
XM_043237439.1 mRNA downstream 401880 21870416 ~ 21878792 (-) True LOC122343106
XM_043237440.1 mRNA downstream 401900 21870415 ~ 21878772 (-) False LOC122343106
XM_043236101.1 mRNA downstream 420388 21847120 ~ 21860284 (-) True LOC122342306
XM_043236099.1 mRNA downstream 500053 21775098 ~ 21780619 (-) True LOC122342303
XM_043237479.1 mRNA upstream 34719 22315908 ~ 22320097 (-) True LOC122343126
XM_043237170.1 mRNA upstream 44321 22325510 ~ 22334793 (-) True LOC122342947
XM_043237171.1 mRNA upstream 104674 22385863 ~ 22395600 (-) True LOC122342948
XM_043237275.1 mRNA upstream 147885 22429074 ~ 22431623 (-) True LOC122343006
XM_043237366.1 mRNA upstream 214097 22495286 ~ 22499529 (-) True LOC122343060
TU45110 other downstream 35512 22128454 ~ 22245160 (-) True G30450
TU45123 other downstream 64202 22216035 ~ 22216470 (-) True G30457
TU45011 other downstream 503866 21629617 ~ 21776806 (-) True G30396
TU44977 other downstream 540342 21737091 ~ 21740330 (-) True G30372
TU45006 other downstream 894235 21383469 ~ 21386437 (-) True G30395
TU45768 other upstream 1153791 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 1215940 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 1464297 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 1829035 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 2022907 24304096 ~ 24497596 (-) True G31134

Expression Profile