RNA id: TU45342



Basic Information


Item Value
RNA id TU45342
length 748
RNA type TUCP
GC content 0.41
exon number 4
gene id LOC122342321
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23163695 ~ 23168007 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCGAACTGTCATTATTGCTTCCTGATGTGGAAATGTACATGGACCTAATGAAGAAACCAAGGACATACTGAGAACTTGTCTAGTAGCAGAACAACCTGGTCAGTCGTGAGCTGTGGAGCGCAAAGTCACTTCCTTATTCATctgTGAGTTGGTGAAGGAAGATGGCGTTTGTCAAGGAGCTGCTCGTGGGGTCACTGAAGGGGCTGGTAGAAGCTGAACTAAAGGAGTTTCACTGGCGCCTAATGAATACATATCATAAGCATATAACAAAGTCTGAATTGGAGAAGGCAGATATATTTGACACAGTAGATAAGATGGTGGTGTGTTTTGGACCAGAAGAAGCTGTGGAGGTCATGGTAGATATCCTGAGAAAGATGAACCAAAATGATCTGGCTGAACAGTTGGTGAAAGAACACACGCAAGTGAGgaattctctctttttctctctcacagctCAGACGGAGGGCAATATGAATATATCTGCTGCTGTTGGAGagcagcaaaactgttttgaaactcacaaaacaaacatgaagaagaaggtagaatatatttttgagggcagcagagaaaatgaagcacaactcaaggctgtttacacagatctgttcatcacagaggGAGATATGGAAGATGTCAATCACGAACATGAAATTCTTAAGATTGATAATGCTTTaaagcacagaaaaacacaggaaaaaccagtcaaatgtaatgatatatttactgaactgaggaaaaataatga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45339 lncRNA upstream 20690 23066254 ~ 23143079 (+) True G30628
TU45356 lncRNA upstream 32064 23131314 ~ 23131705 (+) True G30637
TU45335 lncRNA upstream 37246 23006974 ~ 23126523 (+) True G30624
TU45312 lncRNA upstream 294066 22853481 ~ 22869703 (+) True G30607
TU45317 lncRNA upstream 302199 22858290 ~ 22861570 (+) True G30609
XR_006250714.1 lncRNA downstream 20059 23187316 ~ 23193862 (+) False LOC122343191
XR_006250713.1 lncRNA downstream 20059 23187316 ~ 23188795 (+) False LOC122343191
TU45360 lncRNA downstream 25543 23192800 ~ 23193862 (+) True LOC122343191
TU45375 lncRNA downstream 96340 23263597 ~ 23264466 (+) True G30652
TU45376 lncRNA downstream 97276 23264533 ~ 23264741 (+) True G30653
XM_043236110.1 mRNA upstream 383630 22777983 ~ 22780139 (+) True LOC122342317
XM_043237261.1 mRNA upstream 415149 22739960 ~ 22748620 (+) True LOC122342997
XM_043237257.1 mRNA upstream 457275 22695800 ~ 22706494 (+) True LOC122342996
XM_043237277.1 mRNA downstream 898 23168155 ~ 23183546 (+) True LOC122343008
XM_043237488.1 mRNA downstream 58954 23226211 ~ 23229732 (+) True LOC122343131
XM_043237507.1 mRNA downstream 184670 23351927 ~ 23375871 (+) True LOC122343152
XM_043236120.1 mRNA downstream 446221 23613478 ~ 23614930 (+) True LOC122342330
XM_043237168.1 mRNA downstream 466541 23633798 ~ 24144571 (+) True LOC122342945
TU45351 other upstream 4013 23157559 ~ 23159756 (+) True G30632
TU45355 other upstream 33580 23129106 ~ 23130189 (+) True G30636
TU45293 other upstream 384172 22778042 ~ 22779597 (+) False LOC122342317
XR_006250667.1 other upstream 481057 22661826 ~ 22682712 (+) False LOC122343019
TU44785 other upstream 862250 22296897 ~ 22301519 (+) False LOC122342310
XR_006250665.1 other downstream 950032 24117289 ~ 24122820 (+) False LOC122342976
XR_006250666.1 other downstream 965793 24133050 ~ 24141411 (+) False LOC122342990
XR_006250669.1 other downstream 1287068 24454325 ~ 24466400 (+) False LOC122343028
XR_006250668.1 other downstream 1298197 24465454 ~ 24470867 (+) False LOC122343023
TU45649 other downstream 1469107 24636364 ~ 24638654 (+) False LOC122343159

Expression Profile