RNA id: TU45356



Basic Information


Item Value
RNA id TU45356
length 292
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G30637
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23131314 ~ 23131705 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTGGGTGTCATCTCACTGCTCTGTCCTGTGAAAGTTTATCTTCAACTTTACAAtcatcaaactctgtcctgagagagatggacctgagtaacaatgatctgcaggattcaggagtgaagcttcttTTGGATGGAAGGAAGAGTCCAAACTCTAAGCTGGAGATACTGAGattttccaCATGTAATCTCACCGTGGGAGTTTGTgggagtttgtcttcagttttacaatcctcaaactctgtcctgaaagagctgggcctgagtaacaatgatctgcaggattcaggagtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45335 lncRNA upstream 4791 23006974 ~ 23126523 (+) True G30624
TU45312 lncRNA upstream 261611 22853481 ~ 22869703 (+) True G30607
TU45317 lncRNA upstream 269744 22858290 ~ 22861570 (+) True G30609
XR_006250726.1 lncRNA upstream 579964 22550101 ~ 22551350 (+) True LOC122343204
XR_006250689.1 lncRNA upstream 587483 22542511 ~ 22543831 (+) True LOC122343169
XR_006250714.1 lncRNA downstream 55611 23187316 ~ 23193862 (+) False LOC122343191
XR_006250713.1 lncRNA downstream 55611 23187316 ~ 23188795 (+) False LOC122343191
TU45360 lncRNA downstream 61095 23192800 ~ 23193862 (+) True LOC122343191
TU45375 lncRNA downstream 131892 23263597 ~ 23264466 (+) True G30652
TU45376 lncRNA downstream 132828 23264533 ~ 23264741 (+) True G30653
XM_043236110.1 mRNA upstream 351175 22777983 ~ 22780139 (+) True LOC122342317
XM_043237261.1 mRNA upstream 382694 22739960 ~ 22748620 (+) True LOC122342997
XM_043237257.1 mRNA upstream 424820 22695800 ~ 22706494 (+) True LOC122342996
XM_043236112.1 mRNA downstream 31990 23163695 ~ 23168007 (+) True LOC122342321
XM_043237277.1 mRNA downstream 36450 23168155 ~ 23183546 (+) True LOC122343008
XM_043237488.1 mRNA downstream 94506 23226211 ~ 23229732 (+) True LOC122343131
XM_043237507.1 mRNA downstream 220222 23351927 ~ 23375871 (+) True LOC122343152
XM_043236120.1 mRNA downstream 481773 23613478 ~ 23614930 (+) True LOC122342330
TU45355 other upstream 1125 23129106 ~ 23130189 (+) True G30636
TU45293 other upstream 351717 22778042 ~ 22779597 (+) False LOC122342317
XR_006250667.1 other upstream 448602 22661826 ~ 22682712 (+) False LOC122343019
TU44785 other upstream 829795 22296897 ~ 22301519 (+) False LOC122342310
TU44767 other upstream 899390 22231470 ~ 22231924 (+) True G30218
TU45351 other downstream 25854 23157559 ~ 23159756 (+) True G30632
TU45341 other downstream 32064 23163769 ~ 23167257 (+) False LOC122342321
TU45342 other downstream 32064 23163769 ~ 23167257 (+) False LOC122342321
XR_006250665.1 other downstream 985584 24117289 ~ 24122820 (+) False LOC122342976
XR_006250666.1 other downstream 1001345 24133050 ~ 24141411 (+) False LOC122342990

Expression Profile