Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45653 |
| length | 3995 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 5 |
| gene id | LOC122343125 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 24639089 ~ 24646601 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0043254 | regulation of protein-containing complex assembly | biological_process |
| GO:0044087 | regulation of cellular component biogenesis | biological_process |
| GO:0051128 | regulation of cellular component organization | biological_process |
| GO:0022607 | cellular component assembly | biological_process |
| GO:0065003 | protein-containing complex assembly | biological_process |
| GO:0065008 | regulation of biological quality | biological_process |
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:1902903 | regulation of supramolecular fiber organization | biological_process |
| GO:0090066 | regulation of anatomical structure size | biological_process |
| GO:0051493 | regulation of cytoskeleton organization | biological_process |
| GO:0032956 | regulation of actin cytoskeleton organization | biological_process |
| GO:0007010 | cytoskeleton organization | biological_process |
| GO:0043933 | protein-containing complex subunit organization | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0032970 | regulation of actin filament-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030832 | regulation of actin filament length | biological_process |
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0030029 | actin filament-based process | biological_process |
| GO:0033043 | regulation of organelle organization | biological_process |
| GO:0034622 | cellular protein-containing complex assembly | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0110053 | regulation of actin filament organization | biological_process |
| GO:0008064 | regulation of actin polymerization or depolymerization | biological_process |
| GO:0032535 | regulation of cellular component size | biological_process |
| GO:0032271 | regulation of protein polymerization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45650 | lncRNA | upstream | 1475 | 24636364 ~ 24638654 (+) | True | LOC122343159 |
| XR_006250675.1 | lncRNA | upstream | 1863 | 24636352 ~ 24638266 (+) | False | LOC122343159 |
| TU45587 | lncRNA | upstream | 153242 | 24456022 ~ 24486887 (+) | True | G30812 |
| XR_006250692.1 | lncRNA | upstream | 220561 | 24417843 ~ 24419568 (+) | True | LOC122343172 |
| TU45595 | lncRNA | upstream | 325841 | 24310339 ~ 24314288 (+) | True | G30819 |
| TU45666 | lncRNA | downstream | 26396 | 24672967 ~ 24673594 (+) | False | LOC122343086 |
| TU45676 | lncRNA | downstream | 68126 | 24714697 ~ 24714998 (+) | True | G30877 |
| TU46134 | lncRNA | downstream | 342296 | 24988867 ~ 24989274 (+) | True | G31223 |
| TU46137 | lncRNA | downstream | 667652 | 25314223 ~ 25314596 (+) | True | G31226 |
| TU46139 | lncRNA | downstream | 668608 | 25315179 ~ 25315553 (+) | True | G31228 |
| XM_043237169.1 | mRNA | upstream | 20738 | 24607037 ~ 24619391 (+) | True | LOC122342946 |
| XM_043237238.1 | mRNA | upstream | 34312 | 24595853 ~ 24605817 (+) | True | LOC122342982 |
| XM_043237279.1 | mRNA | upstream | 58335 | 24577163 ~ 24581794 (+) | True | LOC122343010 |
| XM_043237321.1 | mRNA | upstream | 65697 | 24569118 ~ 24574432 (+) | False | LOC122343032 |
| XM_043237438.1 | mRNA | downstream | 2396 | 24648967 ~ 24653215 (+) | True | LOC122343105 |
| XM_043237419.1 | mRNA | downstream | 15258 | 24661829 ~ 24665576 (+) | False | LOC122343093 |
| XM_043237418.1 | mRNA | downstream | 15313 | 24661884 ~ 24665576 (+) | True | LOC122343093 |
| XM_043237436.1 | mRNA | downstream | 21135 | 24667706 ~ 24672151 (+) | False | LOC122343104 |
| XM_043237437.1 | mRNA | downstream | 21170 | 24667741 ~ 24672151 (+) | True | LOC122343104 |
| TU45649 | other | upstream | 1475 | 24636364 ~ 24638654 (+) | False | LOC122343159 |
| XR_006250668.1 | other | upstream | 169262 | 24465454 ~ 24470867 (+) | False | LOC122343023 |
| XR_006250669.1 | other | upstream | 173729 | 24454325 ~ 24466400 (+) | False | LOC122343028 |
| XR_006250666.1 | other | upstream | 498718 | 24133050 ~ 24141411 (+) | False | LOC122342990 |
| XR_006250665.1 | other | upstream | 517309 | 24117289 ~ 24122820 (+) | False | LOC122342976 |
| TU45681 | other | downstream | 74853 | 24721424 ~ 24728447 (+) | True | G30882 |
| XR_006250558.1 | other | downstream | 97277 | 24743848 ~ 24767552 (+) | False | LOC122342408 |
| XR_006250648.1 | other | downstream | 988471 | 25635042 ~ 25684620 (+) | False | LOC122342771 |
| XR_006250647.1 | other | downstream | 988474 | 25635045 ~ 25688230 (+) | False | LOC122342771 |
| TU46238 | other | downstream | 1047231 | 25693802 ~ 25695381 (+) | True | G31298 |
