RNA id: TU45749



Basic Information


Item Value
RNA id TU45749
length 389
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G30938
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22858259 ~ 22861620 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAGAAGTAGATAAGGTActtgtcacggttgtgtggtaagcacgagagcacacaacgagattcaatgaaaataaaggggtttaattccagaatggtaaaataaaagatatacagacaggcaggcaggcaggcaggcaggtcggtcgaacaggcaggcaggataaacacaggtagggacattgggtagggaccttgacgctcggacaaacagaactgaaaagacaggacttaaatacacggggtaattgacgagacacagctgatgacaataacataattaacacggagggaaggcagggcacagggagcacatggcacgggacaaaaacataaacaaagagtccagagatgtgacagtacttaaaaatacaagtaaaagaCGACATGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45737 lncRNA downstream 68957 22787546 ~ 22789302 (-) True G30926
TU45728 lncRNA downstream 85405 22770855 ~ 22772854 (-) True G30920
TU45232 lncRNA downstream 288201 22569635 ~ 22570058 (-) True G30547
TU45204 lncRNA downstream 357085 22500162 ~ 22501174 (-) True G30525
TU45195 lncRNA downstream 370090 22487420 ~ 22488169 (-) True G30520
TU45790 lncRNA upstream 190128 23051748 ~ 23053620 (-) True G30967
TU45822 lncRNA upstream 402112 23263732 ~ 23264216 (-) True G30992
TU45823 lncRNA upstream 404138 23265758 ~ 23266130 (-) True G30993
TU45824 lncRNA upstream 405005 23266625 ~ 23266858 (-) True G30994
TU45844 lncRNA upstream 530059 23391679 ~ 23397273 (-) True G31012
XM_043237504.1 mRNA downstream 2127 22840016 ~ 22856132 (-) True LOC122343148
XM_043237500.1 mRNA downstream 76005 22781662 ~ 22782254 (-) True LOC122343143
XM_043237282.1 mRNA downstream 88685 22759421 ~ 22769574 (-) True LOC122343013
XM_043237408.1 mRNA downstream 165549 22690338 ~ 22692710 (-) True LOC122343088
XM_043237357.1 mRNA downstream 177054 22676458 ~ 22681205 (-) True LOC122343051
XM_043236113.1 mRNA upstream 334927 23196547 ~ 23197615 (-) True LOC122342322
XM_043236114.1 mRNA upstream 339850 23201470 ~ 23219173 (-) True LOC122342323
XM_043236115.1 mRNA upstream 368422 23230042 ~ 23237080 (-) True LOC122342324
XM_043236116.1 mRNA upstream 378455 23240075 ~ 23250614 (-) True LOC122342325
XM_043237389.1 mRNA upstream 394745 23256365 ~ 23259319 (-) False LOC122343073
TU45110 other downstream 613099 22128454 ~ 22245160 (-) True G30450
TU45123 other downstream 641789 22216035 ~ 22216470 (-) True G30457
TU45011 other downstream 1081453 21629617 ~ 21776806 (-) True G30396
TU44977 other downstream 1117929 21737091 ~ 21740330 (-) True G30372
TU45006 other downstream 1471822 21383469 ~ 21386437 (-) True G30395
TU45768 other upstream 573360 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 635509 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 883866 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 1248604 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 1442476 24304096 ~ 24497596 (-) True G31134

Expression Profile